Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00172 ATGGAACTCCATCGTTCTCAGAGGAAATCTTCCACCGCGACCATTTCCTCGACCACTCTTCCACTCTATCGCTCCGCTCCTCCTCTCGAAGTCAGGCTTGAAGAATTCGAACTTTATGCCATAGATCGTCTTCGAGTTCTTAAAGGAATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGACATGGAGAAACTGGTTAGAGACTTGTTGAAGGCCCATATGAAACATCCACAGGCATCCGAGGCTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTCGTATACTGCAGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTTCGACACCGTTTTCTTTCTGAAAGTCCTGAATCTCAGAAGCAGGTCTTTTCGGAGCTTGGCCTCTCATACAAAGCAATCGGTTATGCAGAGTTTGAGGCTGTGAAGGACAAATTGGTCCAAGTTGCTCGGTTGATTGGTCAGCCTGTACCAAGCGCTGATGCAATATACTATAAGGTACCATGGGAAGAAGTTCCAGAACTGGTGGCTGGTCGAAGGGTATTACTTCATAAAGGATATGCATATATTGCTATCTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCAAAGGCCTTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAGGATCGGTTGACCCCTATCGTTGAAGCCCTTTGCACTAGCTACCTGGGTCCTGACTACTCACAGCCAACAGAGTATGCTGATATATCAATCAAAGACCTTGAACAAATTGCTAAAAGTTCATTTCCTCTTTGCATGCGGCACCTATTTGATAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGAATGCAATTAGGTCTCTTTCTTAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTTGCTTTCTGGAGAGCTGAGTTCTCGCAGAGAGTTGGTGTTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAACTATGGAAAAGAAGGCAAGAGAGTGGATTATTCACCTTATTCCTGTCAAAAAGTCATCTCATCATCACCTGGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCAGAAAATGGAAGATATATTGGACAAAGTGCGAAATAGACACTATCAGTTGGCCTGCACCTTGACATTTGAATCGGTTCATGGTTCGTCATGCGACGCCGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAAGTTTTGCAATCTAAGAACAATTCAACAGCTTAG 1359 42.6 MELHRSQRKSSTATISSTTLPLYRSAPPLEVRLEEFELYAIDRLRVLKGISDGLSRGKKSEDMEKLVRDLLKAHMKHPQASEAVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSESPESQKQVFSELGLSYKAIGYAEFEAVKDKLVQVARLIGQPVPSADAIYYKVPWEEVPELVAGRRVLLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPTEYADISIKDLEQIAKSSFPLCMRHLFDKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGVERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPGVGDHHGCPYRHFSEDNLRAALGKMGVNNQKMEDILDKVRNRHYQLACTLTFESVHGSSCDAGINHPNQYFIDSQKVLQSKNNSTA 452
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 986849 995750 + CmoCh08G001720.1 Cmo08g00172 386905
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00172 452 PIRSF DNA_primase_large 2 452 IPR016558 -
Cmo08g00172 452 CDD PriL_PriS_Eukaryotic 22 440 IPR016558 -
Cmo08g00172 452 PANTHER DNA PRIMASE LARGE SUBUNIT 1 449 IPR007238 GO:0006269
Cmo08g00172 452 Gene3D - 1 245 - -
Cmo08g00172 452 Pfam Eukaryotic and archaeal DNA primase, large subunit 172 437 IPR007238 GO:0006269
Cmo08g00172 452 PANTHER DNA PRIMASE LARGE SUBUNIT 1 449 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00172 K02685 - csv:101217274 844.343