Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00194 ATGAGCTGCCTGTGCAGCGTGAAGGCTGAGAACACATTGCAGCCGCCGGTGAAGCTCATATGGCATTACTACAAGCTCAACACAACATGCCCTGATGCTGAGACATACATAAAGCATCAGGTCAAGTTGTTTTGGCAAAAGGATAAGAGCATCACTGCCAAGTTCCTGCGTTTGCTCTCCGCCGATTGCCTCTCCAAAAACGGTTGTGATGGTTCGATACTTCTCGATGGACGAAACTCAGAGAAAAACGCACCACAAAACCAAGGCCTAGAAGGGTTCGAAGAAATCGACAAGATCAAAATTGTACTCGAAGACCGTTGTCCGGGTGTTGTTTCTTGTACAGATATTCTTAACCTAGCCACTCGAGATGCTGCCCATTTGGCCGGTGCACCGTCGTATCCCGTTTATACGGGAAGGAGGGATTGTTTAAGAACGAGTATCGATGCAGTAGATTTCCCGTCCCCCTCTATATCATGGCAAGAAGGGCTAGCATATTTCGAGTCCAAGAGTCTCGACGTCTTAGACATGGCAACACTTCTAGGAGCACATTCAATGGGGAAAACACATTGCAGCTACATCAAGGACAGGCTATACAATTTCAATGGCACAAAAAAAGCAGACCCAACAATGAACAAATCATTGTTAAAACAGCTTCAAAAGAAATGCCCAAAGAAATCAAAAACAGACCCAACAGTGAACCTAACACCAAAATCTGGAAATGACTATCAATTCACAGGTCAGTACTACTCGAGGATCCTTTCGAAGAAGGCGGTACTCGGGATCGACCAACAGCTCCGTTTCGGGGACGACACGATGCAAATTGCCCAAGAGTTTGCTCCAAAATCTGGATTTGAAGACTTCCGGAGGTCCTTTGCTTTGTCCATGAGTAGGATGGGGAATATCAAGGTTTTGACCGGAAAAGATGGCGAGATCCGGCGAAATTGTCGACGGAGAAACTAG 960 46.25 MSCLCSVKAENTLQPPVKLIWHYYKLNTTCPDAETYIKHQVKLFWQKDKSITAKFLRLLSADCLSKNGCDGSILLDGRNSEKNAPQNQGLEGFEEIDKIKIVLEDRCPGVVSCTDILNLATRDAAHLAGAPSYPVYTGRRDCLRTSIDAVDFPSPSISWQEGLAYFESKSLDVLDMATLLGAHSMGKTHCSYIKDRLYNFNGTKKADPTMNKSLLKQLQKKCPKKSKTDPTVNLTPKSGNDYQFTGQYYSRILSKKAVLGIDQQLRFGDDTMQIAQEFAPKSGFEDFRRSFALSMSRMGNIKVLTGKDGEIRRNCRRRN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1131803 1133522 - CmoCh08G001940.1 Cmo08g00194 386927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00194 319 Pfam Peroxidase 38 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Cmo08g00194 319 Gene3D - 27 319 - -
Cmo08g00194 319 PANTHER PEROXIDASE 25-RELATED 8 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 ProSiteProfiles Plant heme peroxidase family profile. 18 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 CDD secretory_peroxidase 18 317 IPR033905 GO:0004601|GO:0042744
Cmo08g00194 319 PANTHER PEROXIDASE 61-RELATED 8 317 - -
Cmo08g00194 319 Gene3D Peroxidase, domain 2 153 301 - -
Cmo08g00194 319 SUPERFAMILY Heme-dependent peroxidases 25 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo08g00194 319 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00194 Cmo-Chr8:1131803 Cmo18g00674 Cmo-Chr18:8586581 4.89E-71 dispersed
Cmo08g00194 Cmo-Chr8:1131803 Cmo02g00676 Cmo-Chr2:4288488 8.23E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00194 K00430 - csv:101213667 551.592