Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00285 ATGAGAGGAAATGGAACGTCCAATAAAGGAGGGCAGATGGGGAAGGTGAGCGTTTCGTCTGCCATGTCTCATCAGCTGCTTTCTTCCATACCCTTTTTTCACCATTACAAAACAACAAACCTCTGCAACGGAGATACCCACTTGCAGCAATTCGCCATTTCTCCCATTTTCCCCCTTTCATTCCACCTCTGTTTCGCTCGCTTCGAGACGATATTGCAAAACGTCGCAGGACAAATGGGAACAGCCTCTGTACAATGTCTAATTAACAGTATTTCCAGATTCATTCATCTTGTTTCATGCCATACTACAAAGTCTTTGCCTCTTCCTAAGAACTGCAAGAATCTTGCTGTTGTCTTGAAACATCTGAAACTCGTGCTTGATGATGTCATTAGTCTCAAACTATCCTCCGATGAGTTACTTTATAGAGAATGTGAGTCTCTGGATATCGCTGTTAATGACGCTCGGGAGTTCATTGAAAACTGGTGTCCTAAGATGAGCAAAATTTGCAGCGCTTTGAAATGTGATCCGCTGCTTATAAAGATTCAAAGCTCTTTACAAGAGATTTGTGAGATTGTATGGAAGTTGTCGGAATCAGTATCATGTAGCTCAAGTCTAAATGCTGTTCAGAAATGTCTTGAAGGTCTTCAATCATTGAAGCAGGAAAGGATATCTGAATCTATAGAAGAGGCTTTAATTAGTCAAAGGAGTGGCATTGGTCCGAACTCCGAAGATCTTCTAAAAATTATCGAAGTTCTTCATTTGATGTCGAATCAAGAACTTCTGAAGGAGACTATAGCAGTCGAAAAGGAGAGAATTGATGCTGAACAAAACAATGCGAAAGAGGAACTATATCGGATCAACGAAATTATGGATCTAATTATCCGTATACGAGATTGGATGATTAGAAAGGACTATTTTCATGGGATAAATGGAGTATCAGTTCCTTCATACTTCCGCTGTCCATTGTCGTTGGAACTGATGCTTGATCCAGTAATTGTGGCGTCTGGCCAAACTTATGACAGGTCCTCTATTCAAAAGTGGATAGATAGTGGGCTGAACATCTGCCCCAACACTCATCAGACGCTCACGCATACAAATCTCATTCCCAATTACACAGTTAAAGCCATGATTTTGAGTTGGTGCGATGAAAACAAACTGAATATTTCTAGTTTATCATCGTTGGTTCAATTGTCTCGGCAGGATTCAAATCGAAGTGATAGCTCTCGATCATCTCCTGAAGTTGAAAAGGGTTCTAACAAGCGAAATGGGGACGTTTTTACTAGTTTAATTGGGGGAAAATCTAATGAAGGCCAGAGAAACGAAACCGAAAAGTTTGACCACCCTTCCCCTCAGCAGTCATATATCTACAGCAGGAGTGTATCAGCCTCCAGTGCCTTCTCTAGCATTGATTATGTTCCCTCGGCCCTTAATGAGGTGTTGAAGATATCAACTAAACACGAAATCACATCAGAACATCCTACTGCATCTCATAATGAAGCATCGTGGTTGAATTCATCATTAGAAGGTGGACAATTACAGGCTTGTAAAACAGAGACAGGCATGGTGGAGAATGGAAACTGTAATAGTACAACAGGTAACTTAGTTCCAGTCGAACCTGAATCCGATAACTCGTCGGGGGATTTGCATATCAAGAAATTAGTTGCAGACCTTCAGAGCCAAAAGGATGAAGTTAAAATGAAAGCTGCAGAAGAATTAAGGCTTCTTGCCAAGGATAACGTAGAGAACCGTGTTATAATAGGCCAATGTGGGGCTATAGGCCCCTTACTTTCACTGTTATATTCCGATGGAAAGCAGATACAAGAGCATGCAGTGACAGCTCTCTTAAACCTGTCAATTAATGAAAATAATAAAGTCATGATTGCACAAGGAGGAGCTATAGAACCACTTATTCATGTCTTGAAGACAGGAACATCTACTGCTAAAGAAAATTCTGCAGCAACTTTATTCAGTCTCTCTGTATTGGAAGAATACAAGGCCAAAATCGGTCAGTCTGGTGCAGTTAAAGCCTTGGTCAATCTCTTAGGTGAGGGTACACTGAGGGGTAAGAAAGATGCAGCCACTGCTTTGTTCAACTTATCAATTTTTCATGAAAATAAGGCTCGTATAGTTCAAGCAGGAGCAGTTAAGTACCTTGTTGGGCTACTAGCCACTACTACGGGTATGGTTGATAAGGCTGCTGCACTTCTTGCTAATTTGTCGACAATTTCGGAGGGACGATTGGCAATTGCTCGGGAAGGGGGTATACCCTTGTTGGTAGAAATTGTTGAATGTGGATCTACGAGAGGAAAGGAAAATGCTGCATCTATTCTGTTGCAACTATGCCTTCATAGTCCCAAGTTTTGTACCCTGGTTCTCCAAGAAGGAGCCGTTCCACCTCTCGTCGCCCTATCTCAGTCTGGCACACCTAGAGCAAAAGAAAAGGCACAACAGCTACTCAGCCATTTTCGGAATCAAAGAGATGGAAGCACAGGGAAAGCAAAATCATAG 2508 41.75 MRGNGTSNKGGQMGKVSVSSAMSHQLLSSIPFFHHYKTTNLCNGDTHLQQFAISPIFPLSFHLCFARFETILQNVAGQMGTASVQCLINSISRFIHLVSCHTTKSLPLPKNCKNLAVVLKHLKLVLDDVISLKLSSDELLYRECESLDIAVNDAREFIENWCPKMSKICSALKCDPLLIKIQSSLQEICEIVWKLSESVSCSSSLNAVQKCLEGLQSLKQERISESIEEALISQRSGIGPNSEDLLKIIEVLHLMSNQELLKETIAVEKERIDAEQNNAKEELYRINEIMDLIIRIRDWMIRKDYFHGINGVSVPSYFRCPLSLELMLDPVIVASGQTYDRSSIQKWIDSGLNICPNTHQTLTHTNLIPNYTVKAMILSWCDENKLNISSLSSLVQLSRQDSNRSDSSRSSPEVEKGSNKRNGDVFTSLIGGKSNEGQRNETEKFDHPSPQQSYIYSRSVSASSAFSSIDYVPSALNEVLKISTKHEITSEHPTASHNEASWLNSSLEGGQLQACKTETGMVENGNCNSTTGNLVPVEPESDNSSGDLHIKKLVADLQSQKDEVKMKAAEELRLLAKDNVENRVIIGQCGAIGPLLSLLYSDGKQIQEHAVTALLNLSINENNKVMIAQGGAIEPLIHVLKTGTSTAKENSAATLFSLSVLEEYKAKIGQSGAVKALVNLLGEGTLRGKKDAATALFNLSIFHENKARIVQAGAVKYLVGLLATTTGMVDKAAALLANLSTISEGRLAIAREGGIPLLVEIVECGSTRGKENAASILLQLCLHSPKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQRDGSTGKAKS 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1768181 1776021 - CmoCh08G002850.1 Cmo08g00285 387018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00285 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 713 754 IPR000225 GO:0005515
Cmo08g00285 835 SMART Ubox_2 317 380 IPR003613 GO:0004842|GO:0016567
Cmo08g00285 835 Pfam Armadillo/beta-catenin-like repeat 579 618 IPR000225 GO:0005515
Cmo08g00285 835 Pfam Armadillo/beta-catenin-like repeat 663 700 IPR000225 GO:0005515
Cmo08g00285 835 Gene3D - 541 686 IPR011989 -
Cmo08g00285 835 SUPERFAMILY RING/U-box 312 386 - -
Cmo08g00285 835 PANTHER U BOX DOMAIN-CONTAINING 84 830 - -
Cmo08g00285 835 CDD RING-Ubox_PUB 318 360 IPR045210 -
Cmo08g00285 835 MobiDBLite consensus disorder prediction 406 420 - -
Cmo08g00285 835 SUPERFAMILY ARM repeat 550 822 IPR016024 -
Cmo08g00285 835 Gene3D - 687 832 IPR011989 -
Cmo08g00285 835 MobiDBLite consensus disorder prediction 814 835 - -
Cmo08g00285 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 672 714 IPR000225 GO:0005515
Cmo08g00285 835 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 84 830 - -
Cmo08g00285 835 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 590 632 IPR000225 GO:0005515
Cmo08g00285 835 Coils Coil 257 278 - -
Cmo08g00285 835 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 313 388 IPR013083 -
Cmo08g00285 835 MobiDBLite consensus disorder prediction 421 436 - -
Cmo08g00285 835 MobiDBLite consensus disorder prediction 399 452 - -
Cmo08g00285 835 SMART arm_5 620 660 IPR000225 GO:0005515
Cmo08g00285 835 SMART arm_5 702 741 IPR000225 GO:0005515
Cmo08g00285 835 SMART arm_5 579 619 IPR000225 GO:0005515
Cmo08g00285 835 SMART arm_5 661 701 IPR000225 GO:0005515
Cmo08g00285 835 SMART arm_5 742 782 IPR000225 GO:0005515
Cmo08g00285 835 Pfam U-box domain 314 385 IPR003613 GO:0004842|GO:0016567
Cmo08g00285 835 ProSiteProfiles U-box domain profile. 313 387 IPR003613 GO:0004842|GO:0016567
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00285 - - - csv:101219353 1217.99
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00683 Cmo-Chr7:3085127 Cmo08g00285 Cmo-Chr8:1768181 4.19E-100 dispersed
Cmo08g00285 Cmo-Chr8:1768181 Cmo20g00999 Cmo-Chr20:5999322 7.26E-164 dispersed
Cmo20g00684 Cmo-Chr20:3363662 Cmo08g00285 Cmo-Chr8:1768181 3.01E-34 dispersed
Cmo17g01302 Cmo-Chr17:10215174 Cmo08g00285 Cmo-Chr8:1768181 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo11g01193 . 1 1040 U-box Gene Family AT5G15400 75.8 0.0e+00 1565.4
Cmo14g00572 . 1 1082 U-box Gene Family AT5G15400 73.6 0.0e+00 1561.2
Cmo02g00518 CCT,CST 1 814 U-box Gene Family AT5G67340 50.4 4.3e-121 433.0
Cmo08g00285 . 79 835 U-box Gene Family AT3G54790 52.0 1.7e-131 467.6
Cmo02g00518 CCT,CST 197 814 U-box Gene Family AT2G23140 64.4 1.3e-113 407.9
Cmo20g00999 CCT,CST 214 847 U-box Gene Family AT2G23140 62.9 1.4e-110 397.9
Cmo05g00089 . 1 772 U-box Gene Family AT1G24330 59.2 7.1e-242 834.3
Cmo12g00050 . 1 789 U-box Gene Family AT1G24330 56.6 4.9e-235 811.6
Cmo18g00698 CST 1 760 U-box Gene Family AT1G24330 57.3 2.6e-228 789.3
Cmo04g01920 CST 1 833 U-box Gene Family AT1G24330 51.8 2.4e-213 739.6
Cmo05g00089 . 1 771 U-box Gene Family AT1G67530 59.7 6.3e-238 821.2
Cmo12g00050 . 1 713 U-box Gene Family AT1G67530 61.2 1.4e-232 803.5
Cmo18g00698 CST 1 760 U-box Gene Family AT1G67530 57.3 1.8e-224 776.5
Cmo04g01920 CST 1 833 U-box Gene Family AT1G67530 51.3 3.0e-208 722.6
Cmo07g00279 . 1 362 U-box Gene Family AT4G21350 62.9 1.8e-121 433.3
Cmo03g00526 . 1 362 U-box Gene Family AT4G21350 62.6 1.9e-120 429.9
Cmo19g00194 . 134 458 U-box Gene Family AT3G07360 56.7 2.0e-81 300.1
Cmo02g01708 . 134 455 U-box Gene Family AT3G07360 55.4 1.5e-79 293.9
Cmo04g00047 . 261 456 U-box Gene Family AT1G71020 67.7 1.6e-71 267.7
Cmo04g01075 CCT 244 475 U-box Gene Family AT1G71020 57.5 1.2e-66 251.5
Cmo15g00984 CCT 289 492 U-box Gene Family AT1G71020 54.9 2.4e-54 210.7
Cmo18g00911 . 214 417 U-box Gene Family AT1G71020 53.6 1.0e-49 195.3
Cmo13g00131 . 262 431 U-box Gene Family AT1G71020 58.4 4.4e-48 189.9
Cmo01g00619 . 261 430 U-box Gene Family AT1G71020 58.8 5.7e-48 189.5
Cmo04g01454 . 240 418 U-box Gene Family AT1G71020 53.3 2.9e-44 177.2
Cmo04g00047 . 16 660 U-box Gene Family AT1G23030 54.8 1.6e-103 374.4
Cmo04g01075 CCT 6 675 U-box Gene Family AT1G23030 54.2 7.9e-103 372.1
Cmo01g00619 . 93 635 U-box Gene Family AT2G28830 60.3 2.6e-103 373.6
Cmo13g00131 . 92 432 U-box Gene Family AT2G28830 55.5 3.0e-91 333.6
Cmo01g00619 . 1 635 U-box Gene Family AT3G46510 69.9 5.4e-166 582.0
Cmo13g00131 . 1 638 U-box Gene Family AT3G46510 68.0 1.9e-158 557.0
Cmo18g00911 . 9 624 U-box Gene Family AT3G46510 58.1 9.7e-123 438.3
Cmo04g01454 . 16 620 U-box Gene Family AT3G46510 55.2 8.8e-108 388.7
Cmo18g00911 . 12 626 U-box Gene Family AT3G54850 68.2 4.8e-164 575.5
Cmo04g01454 . 12 623 U-box Gene Family AT3G54850 63.3 5.4e-147 518.8
Cmo01g00619 . 8 630 U-box Gene Family AT3G54850 55.9 2.8e-103 373.6
Cmo20g00715 . 97 650 U-box Gene Family AT5G42340 65.0 5.1e-124 442.6
Cmo07g01269 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cmo03g00311 CST 9 669 U-box Gene Family AT5G01830 57.6 2.2e-199 693.0
Cmo18g00411 CST 1 707 U-box Gene Family AT1G29340 68.1 3.4e-246 848.6
Cmo13g00612 CST 1 710 U-box Gene Family AT1G29340 67.7 5.5e-244 841.3
Cmo06g00526 . 2 407 U-box Gene Family AT3G52450 54.3 6.2e-126 448.4
Cmo03g00273 . 4 422 U-box Gene Family AT3G52450 52.2 1.6e-118 423.7
Cmo07g01224 . 3 403 U-box Gene Family AT3G52450 52.1 7.8e-113 404.8
Cmo06g00526 . 2 406 U-box Gene Family AT2G35930 56.0 9.9e-126 447.6
Cmo03g00273 . 4 422 U-box Gene Family AT2G35930 51.1 2.2e-117 419.9
Cmo07g01224 . 3 403 U-box Gene Family AT2G35930 53.3 1.9e-113 406.8
Cmo04g00519 . 7 420 U-box Gene Family AT3G19380 65.1 3.2e-148 522.3
Cmo04g00519 . 1 420 U-box Gene Family AT1G49780 65.6 2.0e-153 539.7
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G64660 54.3 2.0e-121 433.3
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G09800 51.8 3.0e-106 382.9
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT3G49810 66.0 2.2e-163 572.8
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT3G49810 63.5 4.1e-157 552.0
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT3G49810 61.1 1.3e-147 520.4
Cmo05g00134 CCT,CST 23 430 U-box Gene Family AT3G49810 62.7 6.1e-137 485.0
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT5G65920 65.1 6.7e-160 561.2
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT5G65920 62.7 6.7e-152 534.6
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT5G65920 61.1 1.3e-144 510.4
Cmo05g00134 CCT,CST 19 430 U-box Gene Family AT5G65920 63.9 6.5e-139 491.5
Cmo06g01094 . 82 935 U-box Gene Family AT2G45910 52.4 9.7e-229 790.8
Cmo14g02105 . 1 876 U-box Gene Family AT2G45910 50.3 1.7e-225 780.0
Cmo05g01403 CST 4 725 U-box Gene Family AT2G19410 50.4 7.3e-210 728.0
Cmo15g01416 . 33 815 U-box Gene Family AT4G25160 53.9 1.8e-222 770.0
Cmo11g00121 . 1 496 U-box Gene Family AT5G65200 51.4 2.5e-95 347.1
Cmo15g00326 CST 51 545 U-box Gene Family AT5G40140 57.4 3.8e-96 349.7
Cmo04g02856 CST 56 531 U-box Gene Family AT5G40140 55.5 4.8e-83 306.2
Cmo13g00931 . 29 490 U-box Gene Family AT5G40140 53.7 1.2e-57 221.9
Cmo05g00990 . 4 812 U-box Gene Family AT1G76390 60.0 9.0e-264 907.1
Cmo05g00990 . 13 812 U-box Gene Family AT1G20780 61.6 9.2e-277 950.3
Cmo05g00089 . 1 773 U-box Gene Family AT1G27910 62.2 1.4e-266 916.4
Cmo18g00698 CST 1 769 U-box Gene Family AT1G27910 62.4 1.3e-259 893.3
Cmo12g00050 . 1 797 U-box Gene Family AT1G27910 60.7 1.1e-258 890.2
Cmo04g01920 CST 1 842 U-box Gene Family AT1G27910 55.9 2.9e-243 839.0
Cmo07g00660 . 1 606 U-box Gene Family AT5G67530 73.2 3.6e-262 901.4
Cmo03g00955 . 1 558 U-box Gene Family AT5G67530 78.0 8.1e-254 873.6
Cmo14g02050 . 3 157 U-box Gene Family AT5G67530 52.9 5.6e-45 179.9
Cmo06g01151 . 3 156 U-box Gene Family AT5G67530 52.6 2.8e-44 177.6
Cmo14g01882 CST 1 518 U-box Gene Family AT1G04510 74.7 4.1e-225 778.1
Cmo06g01305 CST 1 516 U-box Gene Family AT1G04510 74.8 1.4e-222 769.6
Cmo06g01305 CST 1 485 U-box Gene Family AT2G33340 73.9 1.3e-209 726.5
Cmo14g01882 CST 1 485 U-box Gene Family AT2G33340 73.3 3.2e-208 721.8
Cmo02g01709 . 11 291 U-box Gene Family AT3G07370 62.6 5.0e-97 351.7
Cmo19g00193 . 10 309 U-box Gene Family AT3G07370 58.3 3.0e-94 342.4
Cmo11g01193 . 1 1040 U-box Gene Family AT5G15400 75.8 0.0e+00 1565.4
Cmo14g00572 . 1 1082 U-box Gene Family AT5G15400 73.6 0.0e+00 1561.2
Cmo02g00518 CCT,CST 1 814 U-box Gene Family AT5G67340 50.4 4.3e-121 433.0
Cmo08g00285 . 79 835 U-box Gene Family AT3G54790 52.0 1.7e-131 467.6
Cmo02g00518 CCT,CST 197 814 U-box Gene Family AT2G23140 64.4 1.3e-113 407.9
Cmo20g00999 CCT,CST 214 847 U-box Gene Family AT2G23140 62.9 1.4e-110 397.9
Cmo05g00089 . 1 772 U-box Gene Family AT1G24330 59.2 7.1e-242 834.3
Cmo12g00050 . 1 789 U-box Gene Family AT1G24330 56.6 4.9e-235 811.6
Cmo18g00698 CST 1 760 U-box Gene Family AT1G24330 57.3 2.6e-228 789.3
Cmo04g01920 CST 1 833 U-box Gene Family AT1G24330 51.8 2.4e-213 739.6
Cmo05g00089 . 1 771 U-box Gene Family AT1G67530 59.7 6.3e-238 821.2
Cmo12g00050 . 1 713 U-box Gene Family AT1G67530 61.2 1.4e-232 803.5
Cmo18g00698 CST 1 760 U-box Gene Family AT1G67530 57.3 1.8e-224 776.5
Cmo04g01920 CST 1 833 U-box Gene Family AT1G67530 51.3 3.0e-208 722.6
Cmo07g00279 . 1 362 U-box Gene Family AT4G21350 62.9 1.8e-121 433.3
Cmo03g00526 . 1 362 U-box Gene Family AT4G21350 62.6 1.9e-120 429.9
Cmo19g00194 . 134 458 U-box Gene Family AT3G07360 56.7 2.0e-81 300.1
Cmo02g01708 . 134 455 U-box Gene Family AT3G07360 55.4 1.5e-79 293.9
Cmo04g00047 . 261 456 U-box Gene Family AT1G71020 67.7 1.6e-71 267.7
Cmo04g01075 CCT 244 475 U-box Gene Family AT1G71020 57.5 1.2e-66 251.5
Cmo15g00984 CCT 289 492 U-box Gene Family AT1G71020 54.9 2.4e-54 210.7
Cmo18g00911 . 214 417 U-box Gene Family AT1G71020 53.6 1.0e-49 195.3
Cmo13g00131 . 262 431 U-box Gene Family AT1G71020 58.4 4.4e-48 189.9
Cmo01g00619 . 261 430 U-box Gene Family AT1G71020 58.8 5.7e-48 189.5
Cmo04g01454 . 240 418 U-box Gene Family AT1G71020 53.3 2.9e-44 177.2
Cmo04g00047 . 16 660 U-box Gene Family AT1G23030 54.8 1.6e-103 374.4
Cmo04g01075 CCT 6 675 U-box Gene Family AT1G23030 54.2 7.9e-103 372.1
Cmo01g00619 . 93 635 U-box Gene Family AT2G28830 60.3 2.6e-103 373.6
Cmo13g00131 . 92 432 U-box Gene Family AT2G28830 55.5 3.0e-91 333.6
Cmo01g00619 . 1 635 U-box Gene Family AT3G46510 69.9 5.4e-166 582.0
Cmo13g00131 . 1 638 U-box Gene Family AT3G46510 68.0 1.9e-158 557.0
Cmo18g00911 . 9 624 U-box Gene Family AT3G46510 58.1 9.7e-123 438.3
Cmo04g01454 . 16 620 U-box Gene Family AT3G46510 55.2 8.8e-108 388.7
Cmo18g00911 . 12 626 U-box Gene Family AT3G54850 68.2 4.8e-164 575.5
Cmo04g01454 . 12 623 U-box Gene Family AT3G54850 63.3 5.4e-147 518.8
Cmo01g00619 . 8 630 U-box Gene Family AT3G54850 55.9 2.8e-103 373.6
Cmo20g00715 . 97 650 U-box Gene Family AT5G42340 65.0 5.1e-124 442.6
Cmo07g01269 CST 9 672 U-box Gene Family AT5G01830 57.0 2.6e-200 696.0
Cmo03g00311 CST 9 669 U-box Gene Family AT5G01830 57.6 2.2e-199 693.0
Cmo18g00411 CST 1 707 U-box Gene Family AT1G29340 68.1 3.4e-246 848.6
Cmo13g00612 CST 1 710 U-box Gene Family AT1G29340 67.7 5.5e-244 841.3
Cmo06g00526 . 2 407 U-box Gene Family AT3G52450 54.3 6.2e-126 448.4
Cmo03g00273 . 4 422 U-box Gene Family AT3G52450 52.2 1.6e-118 423.7
Cmo07g01224 . 3 403 U-box Gene Family AT3G52450 52.1 7.8e-113 404.8
Cmo06g00526 . 2 406 U-box Gene Family AT2G35930 56.0 9.9e-126 447.6
Cmo03g00273 . 4 422 U-box Gene Family AT2G35930 51.1 2.2e-117 419.9
Cmo07g01224 . 3 403 U-box Gene Family AT2G35930 53.3 1.9e-113 406.8
Cmo04g00519 . 7 420 U-box Gene Family AT3G19380 65.1 3.2e-148 522.3
Cmo04g00519 . 1 420 U-box Gene Family AT1G49780 65.6 2.0e-153 539.7
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G64660 54.3 2.0e-121 433.3
Cmo07g00812 CCT 1 411 U-box Gene Family AT5G09800 51.8 3.0e-106 382.9
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT3G49810 66.0 2.2e-163 572.8
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT3G49810 63.5 4.1e-157 552.0
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT3G49810 61.1 1.3e-147 520.4
Cmo05g00134 CCT,CST 23 430 U-box Gene Family AT3G49810 62.7 6.1e-137 485.0
Cmo09g00300 CCT,CST 1 441 U-box Gene Family AT5G65920 65.1 6.7e-160 561.2
Cmo01g01834 CCT,CST 1 453 U-box Gene Family AT5G65920 62.7 6.7e-152 534.6
Cmo12g00545 CCT,CST 1 449 U-box Gene Family AT5G65920 61.1 1.3e-144 510.4
Cmo05g00134 CCT,CST 19 430 U-box Gene Family AT5G65920 63.9 6.5e-139 491.5
Cmo06g01094 . 82 935 U-box Gene Family AT2G45910 52.4 9.7e-229 790.8
Cmo14g02105 . 1 876 U-box Gene Family AT2G45910 50.3 1.7e-225 780.0
Cmo05g01403 CST 4 725 U-box Gene Family AT2G19410 50.4 7.3e-210 728.0
Cmo15g01416 . 33 815 U-box Gene Family AT4G25160 53.9 1.8e-222 770.0
Cmo11g00121 . 1 496 U-box Gene Family AT5G65200 51.4 2.5e-95 347.1
Cmo15g00326 CST 51 545 U-box Gene Family AT5G40140 57.4 3.8e-96 349.7
Cmo04g02856 CST 56 531 U-box Gene Family AT5G40140 55.5 4.8e-83 306.2
Cmo13g00931 . 29 490 U-box Gene Family AT5G40140 53.7 1.2e-57 221.9
Cmo05g00990 . 4 812 U-box Gene Family AT1G76390 60.0 9.0e-264 907.1
Cmo05g00990 . 13 812 U-box Gene Family AT1G20780 61.6 9.2e-277 950.3
Cmo05g00089 . 1 773 U-box Gene Family AT1G27910 62.2 1.4e-266 916.4
Cmo18g00698 CST 1 769 U-box Gene Family AT1G27910 62.4 1.3e-259 893.3
Cmo12g00050 . 1 797 U-box Gene Family AT1G27910 60.7 1.1e-258 890.2
Cmo04g01920 CST 1 842 U-box Gene Family AT1G27910 55.9 2.9e-243 839.0
Cmo07g00660 . 1 606 U-box Gene Family AT5G67530 73.2 3.6e-262 901.4
Cmo03g00955 . 1 558 U-box Gene Family AT5G67530 78.0 8.1e-254 873.6
Cmo14g02050 . 3 157 U-box Gene Family AT5G67530 52.9 5.6e-45 179.9
Cmo06g01151 . 3 156 U-box Gene Family AT5G67530 52.6 2.8e-44 177.6
Cmo14g01882 CST 1 518 U-box Gene Family AT1G04510 74.7 4.1e-225 778.1
Cmo06g01305 CST 1 516 U-box Gene Family AT1G04510 74.8 1.4e-222 769.6
Cmo06g01305 CST 1 485 U-box Gene Family AT2G33340 73.9 1.3e-209 726.5
Cmo14g01882 CST 1 485 U-box Gene Family AT2G33340 73.3 3.2e-208 721.8
Cmo02g01709 . 11 291 U-box Gene Family AT3G07370 62.6 5.0e-97 351.7
Cmo19g00193 . 10 309 U-box Gene Family AT3G07370 58.3 3.0e-94 342.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005135 1 4 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 2 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo08g00285 Cmo_Chr08 FPKM 0.0 1.775404 0.0 0.497117 0.811016 0.0 0.96667 0.0 1.687432 1.278057