Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00400 ATGGAAGTCGATCGGACGGCCGATAACCATCCCGATCTTCAAGAGAGCTCCGACGACTCCACCCCTAATCTCGCCGAAAGAAAGCTCCGACGAAATGATTCGTTGGACGTCGAATCCCGCACCATCCCCGGCGCCGGCGCCGGCAGCCATGGCCACAAGGTGGCGAGCTGGGTGGTGATATTGCAGTTAGCGTTCCAAAGCATTGGAGTAGTATACGGCGATATCGGAACGTCACCGTTGTACGTGTATGCGAGTACGTTCACGGAGGGAATCAAGCATAGCGACGACGTTTTGGGCGTGCTGTCGTTGATTCTCTACACCCTCACACTCATTCCGTTGCTCAAGTACGTCTTCTTCGTCTTGCAAGCCAACGACAACGGTGAAGGTGGCACATTTGCTTTATACTCCCTCCTCTGCCGATACGCCAAAATCGGGCTGATACCGAGCCAGCAAGTGGAAGATCAAGAGGTGTCGAATTTTCAGGTGGCGCCGCCGACCAACCGCCAGAAAATGGCGTCTTGCCTCAAATCCAAGCTGGAAAACAGCCGCGCCGCCAAGATTTTCTTGCTCTTCGCCACCATGCTTGGCACTTCCATGGTTATCGGCGACGGCGTTCTCACTCCTTCCATCTCAGTTTTGTCGGCCGTCGGAGGAATCAAGAATGCTACCTCGACTATGACACAAGATAAAATAGTGTGGATATCAGCAGCAATCTTGGTTTGCCTGTTCATGGTGCAAAGATTTGGTACCCATAAAGTTGGATACTCCTTTGCTCCCATTATTTGCATTTGGTTTATACTCATTGGTGGCATTGGCTTCTACAACTTCATTAAATTTGACCCTTCTGTCATCAAAGCTGTCAACCCTAAATACATCTTTCAATACTTCAAAAGAAACAAAATGGATGCTTGGATCTCTCTCGGGGGCGTCGTTCTTGCTATTACAGGTACTGAAGCTCTATTTGCGGACGTGGGGCACTTCACAGTGATGTCCATAAGACTAAGCATGTGTTGCGTGACCTACCCGGCTCTCGTCTCCGCCTACGTTGGTCAAGCCTCATTTCTTCGCAAGCATGCTGATCTCGTCTCGGATACCTTTTTCGAATCTATTCCTGGTCCTCTCTATTGGCCTACGTTCGTGGTGGCTGTGCTTGCCTCCATCGTTGCAAGCCAAGCTATGATCTCGGGCACTTTCTCCATCATCCAACAATCCCTCTCCTATGGCTGCTTCCCTAGAGTTAAAGTTGTTCATACTTCTTCGAAGTACGAGGGCCAAGTTTACATCCCGGAAGTTAACTATCTTCTCATGTTTGCTTGTCTTGGAGTCACTCTAGGGTTTAAAGATACGACGAGAATCGGGAATGCCTATGGCATAGCTGTGGTGTTCGTGATGGCACTCACTTCAAGTTTTCTCGTGCTCATCATGATCATGATATGGAAATCGCACGTACTTATTATAATCTCCTATGTTCTAACCATTGGCTTATTGGAATTTCTGTACCTAAGTTCAGTTCTTTACAAGTTCGATCAAGGGGGTTATCTTCCATTAGCTTTTGCTGGGGTTTTGATGATAATAATGTACATTTGGCACGATGTTCATAGAAGAAAATACTACTATGAACTCGAACACAAGATATCCGCTGAAAAGGTGAAGGACATTGCATCCCTCACAACCATCAATCGTGTCCCTGGTCTCGCCCTGTTCTACTCCGAGCTCGTCCAAGGCATTCCCCCGATCTTCAATCATTATCTCGTCAACATCCCGACTCTCCAAAGGGTCCTTATTTTCGTGTCCTTCAAGTCCCTCCCGATTAGCAAAGTCCCGATGGAAGAGCGATTTTTATTCCGACGAGTTGAGCCTCGTGACATCAATGTGTTTCGTTGTGTGGTTCGATATGGATACAGAGATATCATCCATGAACAAGAGTCGTTCGAGCGAGTACTGGTGGAGAGATTGAAAGGGTTTATCGAAGAGGAGTTGTGGACGTTGGAAAACGATGACGGTAGAGTCGAGGAGAAGAGGAGGAAAGTTGAAGAGGAGATAGAGGTGGTGGATAGAGCTTGGAGAGACGGGATTGTTCACTTGATTGGACAAAACGAGGTTGTGGCAAGCAAAGGGTCGGGGTTTGCAAAAAGGGTTTTGATCGATTATGCTTATAATGCATTGAGAAGAAATTTGAGACAAAGTGAAGAGGTCTTTTACATCCCTCCTCTAAGGGTTCTCCGACAAGACCAATCTAAGCCTTTAGAGTCTTCCGTCCTCCCCAGCGTCGGTGTCAGCGGCCATGGCCACTTGGAGACGAGGTGGGATGTGATATCTCAGCGGGTGTTTGGTTTGTAG 2340 47.95 MEVDRTADNHPDLQESSDDSTPNLAERKLRRNDSLDVESRTIPGAGAGSHGHKVASWVVILQLAFQSIGVVYGDIGTSPLYVYASTFTEGIKHSDDVLGVLSLILYTLTLIPLLKYVFFVLQANDNGEGGTFALYSLLCRYAKIGLIPSQQVEDQEVSNFQVAPPTNRQKMASCLKSKLENSRAAKIFLLFATMLGTSMVIGDGVLTPSISVLSAVGGIKNATSTMTQDKIVWISAAILVCLFMVQRFGTHKVGYSFAPIICIWFILIGGIGFYNFIKFDPSVIKAVNPKYIFQYFKRNKMDAWISLGGVVLAITGTEALFADVGHFTVMSIRLSMCCVTYPALVSAYVGQASFLRKHADLVSDTFFESIPGPLYWPTFVVAVLASIVASQAMISGTFSIIQQSLSYGCFPRVKVVHTSSKYEGQVYIPEVNYLLMFACLGVTLGFKDTTRIGNAYGIAVVFVMALTSSFLVLIMIMIWKSHVLIIISYVLTIGLLEFLYLSSVLYKFDQGGYLPLAFAGVLMIIMYIWHDVHRRKYYYELEHKISAEKVKDIASLTTINRVPGLALFYSELVQGIPPIFNHYLVNIPTLQRVLIFVSFKSLPISKVPMEERFLFRRVEPRDINVFRCVVRYGYRDIIHEQESFERVLVERLKGFIEEELWTLENDDGRVEEKRRKVEEEIEVVDRAWRDGIVHLIGQNEVVASKGSGFAKRVLIDYAYNALRRNLRQSEEVFYIPPLRVLRQDQSKPLESSVLPSVGVSGHGHLETRWDVISQRVFGL 779
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2483546 2488151 - CmoCh08G004000.1 Cmo08g00400 387133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00400 779 TIGRFAM kup: potassium uptake protein 63 741 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo08g00400 779 Pfam K+ potassium transporter 64 636 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo08g00400 779 PANTHER POTASSIUM TRANSPORTER 15 742 - -
Cmo08g00400 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 15 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo08g00400 779 MobiDBLite consensus disorder prediction 1 50 - -
Cmo08g00400 779 MobiDBLite consensus disorder prediction 1 37 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00400 Cmo17g01086 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00400 Cmo-Chr8:2483546 Cmo17g01086 Cmo-Chr17:8972728 0 dispersed
Cmo17g01085 Cmo-Chr17:8971054 Cmo08g00400 Cmo-Chr8:2483546 9.22E-29 dispersed
Cmo17g01084 Cmo-Chr17:8965554 Cmo08g00400 Cmo-Chr8:2483546 7.37E-16 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00400 K03549 - csv:101213493 1279.62