Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00401 ATGAGGAGAAAATCCAAAACCCTAAGAACGACGATGACCGCAACGAGGAAGAAGATGAAAGGGACATTGACGAGGCACTTGCAGGTCCAGTTAGGGCAGGTTTCTCTTGCTCCTCTCCACCACCAACGCTCTTCTTCCACCGCCGCTTGCTTCCAAGACTTGCCTGAATCTGAAGCAATGGCGACGGTCAACGATTCTGGCGCTCTCCCTTCCTCGTCTACTAACTTTGAGGACAGAGATTTCATTCTTAGTCAGGATTTCTTCTGCACCCCTGACTATATCACTCCGGACAACCAAAATCTGCTGAATGGCGTGGATTGCTACAAGGAAAGCACCCCTTGCCCCAAGTCTCCAGAGAAGATTAATACTGTTAAAACTAAGAGAAAAATACGTGACGGTGTTTTAGTACATCCTCTGAGTCCAAGTTTGTCTGGCCGTGAACAAGTTGTGGAGCTAGGAAATGACACTTTTGGAACAGATGATGAAGATATGGAGAAAGAGACAATGGCAATGCCAAAGAAACAAAACTATGTTTCTCAATCTGCTGTTGCTTTACGCTGTCGAGTTATGCCTCCTCCTTGCATGAAGAATCCATACTTGAATGATGCTTCAGACATAGGTGTAGACCCATTTGGTAATCAACGAACAAAATGTGCAGATTTTTTTCCCGCACTGTTTAGTGGAGATGGTCTTTCAAGATACCACACCGATTTTCATGAGATAAAGCAAATAGGAACTGGAAATTTTAGCCGTGTTTTCAAGGTATTGAAGAGAATTGATGGTTGCTTATATGCTGTTAAACAAAGCACAAGACCATTGCATCAAGACATAGAAAGGAGGAGAGCTTTGATGGAAGTTCAAGCTTTGGCAGCTTTAGGATCTCATGAAAACATCGTTGGATACTACTCTTCCTGGTTTGAAAATGAGCAACTCTACATTCAAATGGAACTCTGTGATTGTAGTTTATCCACTGGCAGGTATTCTCACCCGTTCTCTGAGGCTGATGCACTGAAAGCCTTGCATCAGATTGCAAAAGCATTGCTGTTTATGCACGAGAAAGGAGTAGTTCATTTAGACGTGAAACCTGACAATATTTATGTCAAAGATGGTGTTTATAAACTTGGTGACTTTGGGTGCGCTACTCTTCTTGATAAAAGCCTACCAATTGAGGAGGGTGATGCACGCTATATGCCTCAAGAGATTCTGAATGAGAGATACGATTATCTTGACAAGGTTGATATATTCTCTTTGGGAGCTGCTATTTATGAGGTTGTGAGAGGTTCGACATTTCCAGAAACACATTTCATGAATCTAAAGGAGGGAAAATTGCCACTCTTTCCCTGTCATTCATTGCAATTTCAAAACTTAATCAAGGCGATGGTGGATCCCGACCCAGCACGACGGCCTTCAGCAAGGGAAGTTCTTCAGAATCCCATATTTGATAAGCCTGCTATTTTTGTAAGATTTCAATCACCACTTTCCCAAGTTCATGCACCAAATTTTGTCTCTAGCATGGTGCAAAATCTGTAA 1530 42.48 MRRKSKTLRTTMTATRKKMKGTLTRHLQVQLGQVSLAPLHHQRSSSTAACFQDLPESEAMATVNDSGALPSSSTNFEDRDFILSQDFFCTPDYITPDNQNLLNGVDCYKESTPCPKSPEKINTVKTKRKIRDGVLVHPLSPSLSGREQVVELGNDTFGTDDEDMEKETMAMPKKQNYVSQSAVALRCRVMPPPCMKNPYLNDASDIGVDPFGNQRTKCADFFPALFSGDGLSRYHTDFHEIKQIGTGNFSRVFKVLKRIDGCLYAVKQSTRPLHQDIERRRALMEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDCSLSTGRYSHPFSEADALKALHQIAKALLFMHEKGVVHLDVKPDNIYVKDGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNERYDYLDKVDIFSLGAAIYEVVRGSTFPETHFMNLKEGKLPLFPCHSLQFQNLIKAMVDPDPARRPSAREVLQNPIFDKPAIFVRFQSPLSQVHAPNFVSSMVQNL 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2491064 2495011 - CmoCh08G004010.1 Cmo08g00401 387134

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00401 509 SMART serkin_6 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g00401 509 ProSitePatterns Protein kinases ATP-binding region signature. 244 267 IPR017441 GO:0005524
Cmo08g00401 509 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 409 482 - -
Cmo08g00401 509 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 19 396 - -
Cmo08g00401 509 Gene3D Phosphorylase Kinase; domain 1 228 316 - -
Cmo08g00401 509 SUPERFAMILY Protein kinase-like (PK-like) 231 508 IPR011009 -
Cmo08g00401 509 PANTHER BNAA08G27310D PROTEIN 409 482 - -
Cmo08g00401 509 Pfam Protein kinase domain 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g00401 509 ProSiteProfiles Protein kinase domain profile. 238 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g00401 509 PANTHER BNAA08G27310D PROTEIN 19 396 - -
Cmo08g00401 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Cmo08g00401 509 Gene3D Transferase(Phosphotransferase) domain 1 317 484 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00401 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1] - csv:101213255 858.211
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00401 Cmo-Chr8:2491064 Cmo06g00611 Cmo-Chr6:3014576 6.99E-22 dispersed
Cmo17g01084 Cmo-Chr17:8965554 Cmo08g00401 Cmo-Chr8:2491064 9.58E-18 dispersed
Cmo08g00401 Cmo-Chr8:2491064 Cmo16g01258 Cmo-Chr16:8970864 2.58E-22 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi7g253 Blo05g00316 . Bda04g00602 . . Bpe06g00511 . . Cmo08g00401 . . . . . . Cpe17g00799 . . . . . . . . Cla09g00570 Cam09g0605 Cec09g0589 Cco09g0583 Clacu09g0604 . Cre09g0578 . Cone20ag0929 . . . . . Cme01g02346 . . . . . . . . . . . Cma08g00407 . Car08g00360 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo04g01496 . 1 294 Core Cell Cycle Gene Families AT3G48750 85.4 6.4e-151 530.8
Cmo18g00940 . 1 294 Core Cell Cycle Gene Families AT3G48750 85.0 7.1e-150 527.3
Cmo01g02100 . 11 307 Core Cell Cycle Gene Families AT3G48750 53.0 3.6e-93 339.0
Cmo07g01231 CST 644 934 Core Cell Cycle Gene Families AT3G48750 56.2 1.1e-91 334.0
Cmo07g01231 CST 644 939 Core Cell Cycle Gene Families AT3G54180 83.7 5.3e-148 521.2
Cmo01g02100 . 11 310 Core Cell Cycle Gene Families AT3G54180 65.8 7.5e-118 421.0
Cmo04g01496 . 1 290 Core Cell Cycle Gene Families AT3G54180 54.1 2.4e-92 336.3
Cmo18g00940 . 1 290 Core Cell Cycle Gene Families AT3G54180 53.8 7.1e-92 334.7
Cmo07g01231 CST 644 939 Core Cell Cycle Gene Families AT2G38620 70.9 1.3e-117 419.9
Cmo01g02100 . 11 310 Core Cell Cycle Gene Families AT2G38620 57.3 1.4e-93 340.1
Cmo01g02100 . 1 307 Core Cell Cycle Gene Families AT1G76540 84.7 3.1e-156 548.5
Cmo07g01231 CST 644 934 Core Cell Cycle Gene Families AT1G76540 66.0 4.3e-113 405.2
Cmo04g01496 . 1 290 Core Cell Cycle Gene Families AT1G76540 53.4 2.9e-93 339.3
Cmo18g00940 . 1 290 Core Cell Cycle Gene Families AT1G76540 53.4 8.4e-93 337.8
Cmo01g02100 . 8 307 Core Cell Cycle Gene Families AT1G20930 88.7 2.3e-159 558.9
Cmo07g01231 CST 644 937 Core Cell Cycle Gene Families AT1G20930 67.1 1.6e-115 413.3
Cmo04g01496 . 1 290 Core Cell Cycle Gene Families AT1G20930 55.7 7.4e-97 351.3
Cmo18g00940 . 1 290 Core Cell Cycle Gene Families AT1G20930 55.4 1.4e-95 347.1
Cmo20g00018 . 1 521 Core Cell Cycle Gene Families AT5G10270 74.8 3.2e-219 758.4
Cmo04g02652 . 606 1123 Core Cell Cycle Gene Families AT5G10270 74.8 9.4e-219 756.9
Cmo11g01308 . 113 431 Core Cell Cycle Gene Families AT5G10270 51.6 2.4e-97 353.6
Cmo01g00886 . 192 508 Core Cell Cycle Gene Families AT5G10270 53.2 7.0e-97 352.1
Cmo04g00583 CST 123 439 Core Cell Cycle Gene Families AT5G10270 54.4 7.0e-97 352.1
Cmo09g01297 . 136 452 Core Cell Cycle Gene Families AT5G10270 52.1 5.9e-96 349.0
Cmo14g01688 CST 113 429 Core Cell Cycle Gene Families AT5G10270 52.3 3.8e-95 346.3
Cmo18g00235 . 93 421 Core Cell Cycle Gene Families AT5G10270 51.3 3.8e-95 346.3
Cmo16g00430 CST 123 439 Core Cell Cycle Gene Families AT5G10270 54.1 3.8e-95 346.3
Cmo06g00920 CCT,CST,ECH 148 464 Core Cell Cycle Gene Families AT5G10270 50.9 5.5e-94 342.4
Cmo13g01141 . 119 437 Core Cell Cycle Gene Families AT5G10270 51.3 1.2e-93 341.3
Cmo01g00848 . 119 437 Core Cell Cycle Gene Families AT5G10270 51.0 2.3e-92 337.0
Cmo04g02652 . 670 1122 Core Cell Cycle Gene Families AT5G64960 74.0 5.2e-184 641.3
Cmo20g00018 . 65 520 Core Cell Cycle Gene Families AT5G64960 70.9 1.1e-178 623.6
Cmo04g00583 CST 177 439 Core Cell Cycle Gene Families AT5G64960 54.0 6.4e-81 298.9
Cmo20g00222 CCT,CST,ECH 950 1212 Core Cell Cycle Gene Families AT5G64960 53.6 8.3e-81 298.5
Cmo11g01308 . 167 431 Core Cell Cycle Gene Families AT5G64960 51.1 1.4e-80 297.7
Cmo02g00098 CCT,CST,ECH 170 434 Core Cell Cycle Gene Families AT5G64960 52.5 3.2e-80 296.6
Cmo09g01297 . 190 452 Core Cell Cycle Gene Families AT5G64960 52.9 2.1e-79 293.9
Cmo01g00886 . 246 508 Core Cell Cycle Gene Families AT5G64960 52.5 2.7e-79 293.5
Cmo18g00235 . 147 409 Core Cell Cycle Gene Families AT5G64960 52.2 2.7e-79 293.5
Cmo16g00430 CST 177 439 Core Cell Cycle Gene Families AT5G64960 53.6 3.5e-79 293.1
Cmo06g00920 CCT,CST,ECH 202 464 Core Cell Cycle Gene Families AT5G64960 51.8 1.0e-78 291.6
Cmo14g01688 CST 167 429 Core Cell Cycle Gene Families AT5G64960 51.4 1.3e-78 291.2
Cmo13g01141 . 173 437 Core Cell Cycle Gene Families AT5G64960 50.7 3.9e-78 289.7
Cmo01g00848 . 173 437 Core Cell Cycle Gene Families AT5G64960 50.4 7.3e-77 285.4
Cmo04g02055 . 197 453 Core Cell Cycle Gene Families AT5G64960 50.4 2.6e-74 276.9
Cmo11g00303 CST 4 414 Core Cell Cycle Gene Families AT1G73690 74.2 5.2e-172 601.3
Cmo10g00341 CST 62 469 Core Cell Cycle Gene Families AT1G73690 73.8 5.7e-171 597.8
Cmo11g00303 CST 12 342 Core Cell Cycle Gene Families AT1G66750 77.1 3.3e-154 542.0
Cmo10g00341 CST 70 398 Core Cell Cycle Gene Families AT1G66750 77.1 1.2e-153 540.0
Cmo11g00303 CST 8 415 Core Cell Cycle Gene Families AT1G18040 75.0 7.9e-173 604.0
Cmo10g00341 CST 66 470 Core Cell Cycle Gene Families AT1G18040 74.8 1.1e-171 600.1
Cmo07g01331 . 20 484 Core Cell Cycle Gene Families AT5G63610 77.7 1.1e-205 713.4
Cmo05g01355 CST 1 481 Core Cell Cycle Gene Families AT4G28980 62.0 6.3e-172 601.3
Cmo12g01289 CST 1 476 Core Cell Cycle Gene Families AT4G28980 59.4 3.9e-166 582.0
Cmo15g00668 CST 5 491 Core Cell Cycle Gene Families AT1G44110 60.5 1.0e-150 530.8
Cmo04g02500 CST 40 476 Core Cell Cycle Gene Families AT1G44110 61.5 1.5e-146 516.9
Cmo17g00798 . 207 503 Core Cell Cycle Gene Families AT1G44110 53.2 1.4e-88 324.3
Cmo01g01578 . 203 470 Core Cell Cycle Gene Families AT1G44110 57.1 1.2e-87 321.2
Cmo09g00483 . 199 465 Core Cell Cycle Gene Families AT1G44110 57.7 1.1e-85 314.7
Cmo08g00616 . 227 488 Core Cell Cycle Gene Families AT1G44110 55.7 4.3e-85 312.8
Cmo01g01859 CCT,CST,ECH 278 557 Core Cell Cycle Gene Families AT1G44110 53.2 6.2e-84 308.9
Cmo12g00518 CCT,CST,ECH 88 371 Core Cell Cycle Gene Families AT1G44110 52.1 3.2e-80 296.6
Cmo09g00266 CCT,CST,ECH 95 378 Core Cell Cycle Gene Families AT1G44110 51.8 4.1e-80 296.2
Cmo12g00256 . 180 451 Core Cell Cycle Gene Families AT1G44110 51.3 6.4e-73 272.3
Cmo01g01578 . 203 477 Core Cell Cycle Gene Families AT1G77390 53.5 2.2e-78 290.4
Cmo17g00798 . 225 499 Core Cell Cycle Gene Families AT1G77390 52.0 7.0e-77 285.4
Cmo09g00483 . 199 465 Core Cell Cycle Gene Families AT1G77390 52.1 1.3e-75 281.2
Cmo08g00616 . 226 488 Core Cell Cycle Gene Families AT1G77390 52.1 2.9e-75 280.0
Cmo01g01859 CCT,CST,ECH 283 555 Core Cell Cycle Gene Families AT1G77390 51.6 5.0e-75 279.3
Cmo12g00256 . 180 442 Core Cell Cycle Gene Families AT1G77390 50.8 4.3e-66 249.6
Cmo09g00483 . 10 477 Core Cell Cycle Gene Families AT5G25380 53.2 5.7e-119 425.2
Cmo01g01578 . 15 473 Core Cell Cycle Gene Families AT5G25380 54.7 6.9e-117 418.3
Cmo17g00798 . 223 503 Core Cell Cycle Gene Families AT5G25380 63.7 5.0e-99 359.0
Cmo12g00256 . 9 440 Core Cell Cycle Gene Families AT5G25380 50.9 1.5e-95 347.4
Cmo08g00616 . 225 488 Core Cell Cycle Gene Families AT5G25380 62.9 9.1e-93 338.2
Cmo04g02500 CST 195 473 Core Cell Cycle Gene Families AT5G25380 53.4 6.8e-80 295.4
Cmo15g00668 CST 211 486 Core Cell Cycle Gene Families AT5G25380 53.6 8.9e-80 295.0
Cmo01g01859 CCT,CST,ECH 282 550 Core Cell Cycle Gene Families AT5G25380 50.9 7.3e-74 275.4
Cmo09g00266 CCT,CST,ECH 99 371 Core Cell Cycle Gene Families AT5G25380 50.5 5.2e-72 269.2
Cmo09g00483 . 37 415 Core Cell Cycle Gene Families AT5G11300 56.2 1.0e-98 357.8
Cmo12g00256 . 179 387 Core Cell Cycle Gene Families AT5G11300 71.3 3.3e-76 283.1
Cmo15g00668 CST 211 431 Core Cell Cycle Gene Families AT5G11300 56.1 3.6e-67 253.1
Cmo04g02500 CST 195 411 Core Cell Cycle Gene Families AT5G11300 55.8 4.0e-66 249.6
Cmo12g00518 CCT,CST,ECH 90 308 Core Cell Cycle Gene Families AT5G11300 53.0 3.5e-62 236.5
Cmo01g01859 CCT,CST,ECH 278 494 Core Cell Cycle Gene Families AT5G11300 55.3 3.0e-61 233.4
Cmo09g00266 CCT,CST,ECH 95 315 Core Cell Cycle Gene Families AT5G11300 54.3 5.6e-60 229.2
Cmo05g00159 CCT,CST,ECH 91 296 Core Cell Cycle Gene Families AT5G11300 51.4 3.7e-56 216.5
Cmo17g00798 . 157 503 Core Cell Cycle Gene Families AT1G15570 61.0 3.7e-118 422.5
Cmo08g00616 . 158 488 Core Cell Cycle Gene Families AT1G15570 60.5 3.8e-110 396.0
Cmo15g00668 CST 212 490 Core Cell Cycle Gene Families AT1G15570 53.8 5.8e-79 292.4
Cmo12g00518 CCT,CST,ECH 76 360 Core Cell Cycle Gene Families AT1G15570 50.5 6.0e-76 282.3
Cmo17g00798 . 4 503 Core Cell Cycle Gene Families AT1G80370 50.4 2.7e-116 416.4
Cmo08g00616 . 4 488 Core Cell Cycle Gene Families AT1G80370 50.7 1.7e-113 407.1
Cmo15g00668 CST 212 491 Core Cell Cycle Gene Families AT1G80370 54.6 3.2e-80 296.6
Cmo04g02500 CST 196 474 Core Cell Cycle Gene Families AT1G80370 52.7 6.6e-78 288.9
Cmo12g00518 CCT,CST,ECH 63 368 Core Cell Cycle Gene Families AT1G80370 50.2 1.1e-77 288.1
Cmo01g01859 CCT,CST,ECH 278 555 Core Cell Cycle Gene Families AT1G80370 50.4 1.4e-75 281.2
Cmo05g00159 CCT,CST,ECH 91 359 Core Cell Cycle Gene Families AT1G80370 51.3 1.4e-72 271.2
Cmo01g01859 CCT,CST,ECH 187 560 Core Cell Cycle Gene Families AT5G43080 57.0 5.9e-111 398.3
Cmo12g00518 CCT,CST,ECH 3 370 Core Cell Cycle Gene Families AT5G43080 57.5 1.0e-110 397.5
Cmo05g00159 CCT,CST,ECH 6 361 Core Cell Cycle Gene Families AT5G43080 57.5 2.5e-109 392.9
Cmo09g00266 CCT,CST,ECH 1 381 Core Cell Cycle Gene Families AT5G43080 56.0 7.2e-109 391.3
Cmo04g02500 CST 197 476 Core Cell Cycle Gene Families AT5G43080 51.1 5.4e-80 295.4
Cmo15g00668 CST 213 492 Core Cell Cycle Gene Families AT5G43080 52.5 1.2e-79 294.3
Cmo09g00483 . 201 479 Core Cell Cycle Gene Families AT5G43080 52.1 1.3e-78 290.8
Cmo01g01578 . 205 477 Core Cell Cycle Gene Families AT5G43080 52.7 3.6e-76 282.7
Cmo08g00616 . 229 488 Core Cell Cycle Gene Families AT5G43080 51.9 1.2e-71 267.7
Cmo12g00518 CCT,CST,ECH 1 370 Core Cell Cycle Gene Families AT1G47210 58.7 1.4e-118 423.7
Cmo05g00159 CCT,CST,ECH 1 361 Core Cell Cycle Gene Families AT1G47210 56.6 2.1e-114 409.8
Cmo01g01859 CCT,CST,ECH 187 560 Core Cell Cycle Gene Families AT1G47210 54.4 5.7e-112 401.7
Cmo09g00266 CCT,CST,ECH 1 381 Core Cell Cycle Gene Families AT1G47210 54.7 1.3e-111 400.6
Cmo01g01578 . 206 477 Core Cell Cycle Gene Families AT1G47210 52.6 2.2e-76 283.5
Cmo17g00798 . 226 498 Core Cell Cycle Gene Families AT1G47210 50.7 1.2e-74 277.7
Cmo08g00616 . 229 488 Core Cell Cycle Gene Families AT1G47210 51.5 2.3e-73 273.5
Cmo01g01859 CCT,CST,ECH 262 558 Core Cell Cycle Gene Families AT1G47220 56.9 6.1e-94 341.7
Cmo09g00266 CCT,CST,ECH 95 379 Core Cell Cycle Gene Families AT1G47220 58.9 1.7e-91 333.6
Cmo12g00518 CCT,CST,ECH 79 370 Core Cell Cycle Gene Families AT1G47220 56.5 4.5e-89 325.5
Cmo05g00159 CCT,CST,ECH 91 361 Core Cell Cycle Gene Families AT1G47220 56.6 8.8e-85 311.2
Cmo01g01578 . 205 471 Core Cell Cycle Gene Families AT1G47220 50.9 2.3e-69 260.0
Cmo01g01859 CCT,CST,ECH 187 560 Core Cell Cycle Gene Families AT1G47230 57.9 2.4e-118 422.9
Cmo09g00266 CCT,CST,ECH 1 381 Core Cell Cycle Gene Families AT1G47230 56.8 7.8e-114 407.9
Cmo12g00518 CCT,CST,ECH 1 370 Core Cell Cycle Gene Families AT1G47230 57.4 1.3e-113 407.1
Cmo05g00159 CCT,CST,ECH 1 361 Core Cell Cycle Gene Families AT1G47230 55.6 2.0e-109 393.3
Cmo04g02500 CST 198 478 Core Cell Cycle Gene Families AT1G47230 51.4 1.5e-77 287.3
Cmo17g00798 . 228 498 Core Cell Cycle Gene Families AT1G47230 51.3 2.0e-72 270.4
Cmo09g00483 . 202 479 Core Cell Cycle Gene Families AT1G47230 50.4 2.2e-71 266.9
Cmo01g01578 . 206 471 Core Cell Cycle Gene Families AT1G47230 51.3 8.2e-71 265.0
Cmo08g00616 . 230 488 Core Cell Cycle Gene Families AT1G47230 52.3 8.2e-71 265.0
Cmo07g01150 . 1 449 Core Cell Cycle Gene Families AT4G37490 53.2 1.5e-113 407.1
Cmo07g01148 . 1 448 Core Cell Cycle Gene Families AT4G37490 53.3 3.8e-112 402.5
Cmo07g01149 . 1 449 Core Cell Cycle Gene Families AT4G37490 51.9 1.8e-109 393.7
Cmo07g01148 . 1 345 Core Cell Cycle Gene Families AT5G06150 55.2 2.6e-84 309.7
Cmo07g01149 . 1 346 Core Cell Cycle Gene Families AT5G06150 54.7 6.5e-83 305.1
Cmo07g01150 . 1 346 Core Cell Cycle Gene Families AT5G06150 54.4 3.2e-82 302.8
Cmo02g01333 . 684 875 Core Cell Cycle Gene Families AT5G06150 64.2 1.1e-61 234.6
Cmo07g01150 . 1 406 Core Cell Cycle Gene Families AT3G11520 56.1 4.5e-104 375.6
Cmo07g01148 . 1 405 Core Cell Cycle Gene Families AT3G11520 55.4 5.0e-103 372.1
Cmo07g01149 . 1 406 Core Cell Cycle Gene Families AT3G11520 54.8 1.2e-101 367.5
Cmo02g01333 . 585 984 Core Cell Cycle Gene Families AT2G26760 55.1 4.7e-109 392.1
Cmo07g01148 . 17 441 Core Cell Cycle Gene Families AT2G26760 50.1 1.0e-100 364.4
Cmo07g01150 . 17 442 Core Cell Cycle Gene Families AT2G26760 50.9 2.3e-100 363.2
Cmo07g01149 . 92 442 Core Cell Cycle Gene Families AT2G26760 57.3 5.2e-100 362.1
Cmo07g00380 . 25 438 Core Cell Cycle Gene Families AT2G17620 61.6 4.2e-127 452.2
Cmo03g00655 . 32 428 Core Cell Cycle Gene Families AT2G17620 61.4 8.2e-123 438.0
Cmo01g02069 . 35 436 Core Cell Cycle Gene Families AT2G17620 53.6 3.3e-108 389.4
Cmo03g00655 . 28 385 Core Cell Cycle Gene Families AT4G35620 60.9 6.9e-105 378.3
Cmo07g00380 . 5 395 Core Cell Cycle Gene Families AT4G35620 56.5 2.9e-103 372.9
Cmo01g02069 . 35 391 Core Cell Cycle Gene Families AT4G35620 52.3 8.4e-87 318.2
Cmo02g01333 . 710 936 Core Cell Cycle Gene Families AT4G35620 50.4 3.2e-54 209.9
Cmo01g02069 . 1 434 Core Cell Cycle Gene Families AT1G20610 64.1 1.4e-143 506.9
Cmo03g00655 . 1 428 Core Cell Cycle Gene Families AT1G20610 55.7 3.0e-117 419.5
Cmo07g00380 . 41 438 Core Cell Cycle Gene Families AT1G20610 57.8 2.6e-116 416.4
Cmo01g02069 . 1 331 Core Cell Cycle Gene Families AT1G76310 64.0 6.1e-105 378.3
Cmo03g00655 . 1 324 Core Cell Cycle Gene Families AT1G76310 53.5 6.8e-80 295.0
Cmo07g00380 . 1 335 Core Cell Cycle Gene Families AT1G76310 50.6 1.6e-73 273.9
Cmo02g01333 . 708 876 Core Cell Cycle Gene Families AT1G76310 53.2 2.8e-41 166.8
Cmo07g01148 . 176 341 Core Cell Cycle Gene Families AT1G76310 51.8 1.1e-40 164.9
Cmo07g01149 . 177 342 Core Cell Cycle Gene Families AT1G76310 51.8 1.1e-40 164.9
Cmo07g01150 . 177 342 Core Cell Cycle Gene Families AT1G76310 51.8 4.0e-40 162.9
Cmo19g01144 . 188 643 Core Cell Cycle Gene Families AT1G16330 52.4 3.2e-118 423.3
Cmo05g00921 . 1 326 Core Cell Cycle Gene Families AT1G70210 64.4 5.9e-108 388.3
Cmo04g00312 . 1 326 Core Cell Cycle Gene Families AT1G70210 63.7 6.5e-107 384.8
Cmo12g00652 . 1 323 Core Cell Cycle Gene Families AT1G70210 61.4 1.8e-101 366.7
Cmo04g01665 . 1 337 Core Cell Cycle Gene Families AT1G70210 60.5 4.2e-98 355.5
Cmo03g00875 . 47 309 Core Cell Cycle Gene Families AT2G22490 55.0 1.3e-76 284.3
Cmo12g00652 . 38 230 Core Cell Cycle Gene Families AT2G22490 50.8 7.6e-45 178.7
Cmo09g00254 CCT,CST,ECH 71 300 Core Cell Cycle Gene Families AT4G34160 53.9 2.6e-64 243.4
Cmo01g01869 CCT,CST,ECH 66 285 Core Cell Cycle Gene Families AT4G34160 53.2 7.8e-61 231.9
Cmo11g01386 CCT,CST,ECH 59 293 Core Cell Cycle Gene Families AT4G34160 51.1 1.3e-60 231.1
Cmo03g00875 . 41 244 Core Cell Cycle Gene Families AT5G65420 64.7 1.1e-69 260.8
Cmo07g00571 . 41 242 Core Cell Cycle Gene Families AT5G65420 60.3 5.1e-62 235.3
Cmo12g00169 . 55 247 Core Cell Cycle Gene Families AT5G65420 55.1 1.5e-58 223.8
Cmo03g00875 . 16 220 Core Cell Cycle Gene Families AT5G10440 55.8 2.0e-56 216.5
Cmo12g00169 . 50 225 Core Cell Cycle Gene Families AT5G10440 52.2 1.8e-49 193.4
Cmo07g00571 . 43 218 Core Cell Cycle Gene Families AT5G10440 55.4 3.1e-49 192.6
Cmo05g00557 . 21 187 Core Cell Cycle Gene Families AT5G10440 53.9 2.5e-46 183.0
Cmo07g00746 . 1 274 Core Cell Cycle Gene Families AT5G27620 65.7 2.3e-100 362.8
Cmo02g01407 CCT,CST 1 86 Core Cell Cycle Gene Families AT2G27960 90.7 6.5e-43 170.2
Cmo13g00270 CCT 1 86 Core Cell Cycle Gene Families AT2G27960 89.5 1.9e-42 168.7
Cmo20g00563 CCT,CST 1 86 Core Cell Cycle Gene Families AT2G27960 88.4 1.6e-41 165.6
Cmo02g01407 CCT,CST 1 76 Core Cell Cycle Gene Families AT2G27970 92.1 2.5e-39 158.3
Cmo13g00270 CCT 1 83 Core Cell Cycle Gene Families AT2G27970 83.1 3.5e-38 154.5
Cmo20g00563 CCT,CST 1 76 Core Cell Cycle Gene Families AT2G27970 89.5 6.0e-38 153.7
Cmo04g01387 . 33 1053 Core Cell Cycle Gene Families AT3G12280 72.3 0.0e+00 1413.3
Cmo18g00852 . 30 1050 Core Cell Cycle Gene Families AT3G12280 72.2 0.0e+00 1409.8
Cmo08g00401 . 2 482 Core Cell Cycle Gene Families AT1G02970 59.7 4.9e-159 558.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009945 1 3 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 32
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74520 PF00069 Pkinase 3.60E-49 CL0016 Cmo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo08g00401 Cmo_Chr08 FPKM 3.23827 3.640977 5.687433 7.031336 5.187975 5.042966 6.14799 9.923255 8.19092 10.151721