Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00403 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACCGCCACAGCCAGAGTTCTTGCTTGTCTTTACGAGAAAGATCTCGAATACCAGTTTGTTCTTCTGGACATGAAGAATAATGAGCACAAGAAAGAGCCCTTCCTCTCCATCAATCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACGATTTTCGAATCAAGGGCCATTACCCAGTACCTGGCCTCCGCCTACGCCAGCAAGGGAAACCAATTGCTGTCGGACGACCCAAAGAAAGCAGCGATCATATCAACATGGATTGAAGTGGAAGGCCACCACTACGACCCACCGGGGGTAGCGCTGTCGTACGAGTATCTTGTCAAGCCACTATTCGGTCTGGGCGAGACAGATCCCGCCGCCGTGGCTGAGAACGAAGCTAAGTTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTGGCAAAAGCAAGTTCTTGGCTGGCGATACGTTCAGTTTGGCAGATCTGCACCACATCCCCAATGTGCACTACTTGTTGGCGACGCCATCGAAGAAGCTGTTCGAGTCACGGCCGCGCGTTAATGCTTGGGTTGCTGAGATCACTGCAAGGCCTTCGTGGGGCAAGGTCCTTGCCTTGCGCAATCAGAAATTGTAA 654 51.68 MASIKVHGSPISTATARVLACLYEKDLEYQFVLLDMKNNEHKKEPFLSINPFGQVPGFQDGDLTIFESRAITQYLASAYASKGNQLLSDDPKKAAIISTWIEVEGHHYDPPGVALSYEYLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLGKSKFLAGDTFSLADLHHIPNVHYLLATPSKKLFESRPRVNAWVAEITARPSWGKVLALRNQKL 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2501640 2503342 + CmoCh08G004030.1 Cmo08g00403 387136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00403 217 CDD GST_C_Phi 92 210 IPR034347 -
Cmo08g00403 217 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Cmo08g00403 217 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cmo08g00403 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cmo08g00403 217 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Cmo08g00403 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Cmo08g00403 217 PANTHER GLUTATHIONE S-TRANSFERASE F6-RELATED 3 216 - -
Cmo08g00403 217 CDD GST_N_Phi 4 76 - -
Cmo08g00403 217 SUPERFAMILY GST C-terminal domain-like 74 213 IPR036282 -
Cmo08g00403 217 Gene3D - 90 214 - -
Cmo08g00403 217 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 216 - -
Cmo08g00403 217 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Cmo08g00403 217 Gene3D Glutaredoxin 1 87 - -
Cmo08g00403 217 SFLD Main.5: Phi-like 1 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00403 Cmo-Chr8:2501640 Cmo16g00640 Cmo-Chr16:3156791 2.47E-10 dispersed
Cmo08g00403 Cmo-Chr8:2501640 Cmo08g00404 Cmo-Chr8:2503761 1.60E-104 tandem
Cmo12g00335 Cmo-Chr12:2098694 Cmo08g00403 Cmo-Chr8:2501640 6.08E-66 transposed
Cmo17g01082 Cmo-Chr17:8958042 Cmo08g00403 Cmo-Chr8:2501640 2.00E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00403 K00799 - csv:101212771 398.282