Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00509 ATGGCGAGGACTAGGGTTCGTGAGCCATCGCGATTATTAGCTGGTAATACATGCAGGATTCGCCTCAGTGAAATTTTCGGGAGGGCGACCCGGTCTATTTTGGGCTTTTTTCTCATGATGGGTCTTTGCAATGGCGTGCATTACCTTTTTAGGCCTTTTTCTCAACCTCGTATTAGCTCTGATACGATCGTAGGTTTGGTTGTTGGGAACTTCATAAGGAAACAACTCGATTTATCAACGCTTAAGACGCTGCGTTATATCGTTGACTTTGGTATGATATGCTATATGTTCTCGCTGGGTTTGGAGATGGATCCATACATACTCTTCAAAGCACCTACACGTGATGCTAAAGTAGCTTACGCTGGGATGATTTCGACACTGGTCTTAGCCTGTTCCATAACCCCATTTATCAGTTTTTCAAAGACAAAAGAGATCAGTTTCATCCTCTCCCTCTCAACTGTCCTCTCTAGCACAGCTTCTCCTGTGCTAACCCGTTTGATCACCCGTCTTAAAATAGGCAAGTCGGATATAGGTCGACTCGTTATTGCTGCTGGGATGCATTCTGATTTTATATCCACTCTCATTATCTGTATTGGTTATCTCTTTTGCAAATGTCAAGAGGTACGTCTCTCCACGACACGAGGTTTTCAATTAGGTTTTGTGTTATTGATACAGATGATAGTCGCAGCAAAGGTTTCGCCTGTATTTATGAACTGGGTTAATAATGAAAACCCCGAGGGTAAACCTATGAAAGGTCCTCACCTGGTTCTTGCAGTTGCTTTCATGGCCTTCCTTTGCAGCTGCCCTACTATACTCGGTTACAATCCGATTCTCAGTGCATTCTTAGCGGGAACGTTTTTACCTCGAGAAGGTCGAGTATCGAGATGGGCCATTGGAAAAATTAACTACCTGCTTAGTACCGTTTTCTATCCCATCTTCTTCTTTTGGATGGGGGCTGAATCCAGGTGGAGTGACTTTGAACCTGGACAAATAATGACATGGGTCAGGTTGATTCTTCTTTTTGTCATTGCAACCGTAGGAAAAGTTGTTGGTACTGTGATTGCTGGGGCAATTTTGGGGTTTCATTGGCCTGAATCAGTAGCACTTGGGCTGCTGTTAACCATGAAGGGCCATTTTCACATATACTTGGCCATTGCTGCAAAAACCGCTGGAAAGACGACGACTTCTACGAGCATTGGGATGGTAATTGTAATCTTCTTCACAATCGTGCATGCGCCAAAAGTTGTCGCACATATAATCAAAAGGGCAAGGAAACGTACACCTACCCATCGAATGGCGCTCCAATTGCTTGATCCATCAAGCGAGCTTAAGATCTTGTTATGTATACATGGACTTCAGAACACTTCAGCAGCCATTAGCATCATGGAGATTTCTCGGGGGATGGCTAAACCTGGAGTTGTTGTATATCTCACAGACATGATTGAACTTACAGATGAAATAGCAGCCACATTAGTGCAGGTTGAAGGAGAGGACACCCTGACTGTAACTCACGCGGGAGTGAGACAAATGAGAGACCAAATTACTGCTGTGGTTCAGAGCTATGTAGACGAAAATGGAGACGGAATTACACTTGGAAGAATGCTAGCTCTCTCAGCATTCAATTCTATGGCTCAGGACATATGCATTTTGGCTGAGGAATTGATGGGAGCTCTTATCATACTGCCATTTCACAAGAGCCAGCGTGCTGATGGGTCTTTGAGTGAGGGCAATTCGGGTTTTCGCTACGTCAACCGCAAGGTTCTCAGGAATGCCCCATGCTCTGTGGGAATCCTAGTGGATCGAGGTCTTGGAACAGTAGAGAAAATTTCGAGATCGTATGCATCTCTGAATGTGGCAGTCATCTTCATCAGCGGTAAAGATGACCGAGAAGCATTAGCGTATGCAGCTCGAGTAGCAAGGCATCCTGGAGTTAAACTCTCTGTGATTAGATTCTTGGTGGATGCTGCTGCAGAGAATGCTGCAAGAAGAGCTGGGACTTACAGGATAAGTGTTGCTGAGCAGGAAGAGGAAATGAGACTAGACGATGAATGTTTTGCTACCTTTTACGAACGACACGTGGCTGGTGGGCACGTTGCTTATGTCGAAAAGCACCTTGCGAGTTCTGCAGAGACATATTCTACATTGAAATTACTGGAAGGGCAATATGCACTCATAATCGTCGGTCGAGGTGGGAAGGTGAACACGGTGTTAACTTTTGGGATGAATGACTGGCAACAATGTCCAGAACTTGGTCCTATAGGGGATGTTCTTTCGGGGTCTGAATTCTCTGTTAGGACCTCGGTTTTAGTCATCCAACAACACAATCTAAAAGGAGAACTAGATGGACTTGATGATGATTTTTCTATTATGGAGATGTCAAGAAACCGATGA 2391 44.63 MARTRVREPSRLLAGNTCRIRLSEIFGRATRSILGFFLMMGLCNGVHYLFRPFSQPRISSDTIVGLVVGNFIRKQLDLSTLKTLRYIVDFGMICYMFSLGLEMDPYILFKAPTRDAKVAYAGMISTLVLACSITPFISFSKTKEISFILSLSTVLSSTASPVLTRLITRLKIGKSDIGRLVIAAGMHSDFISTLIICIGYLFCKCQEVRLSTTRGFQLGFVLLIQMIVAAKVSPVFMNWVNNENPEGKPMKGPHLVLAVAFMAFLCSCPTILGYNPILSAFLAGTFLPREGRVSRWAIGKINYLLSTVFYPIFFFWMGAESRWSDFEPGQIMTWVRLILLFVIATVGKVVGTVIAGAILGFHWPESVALGLLLTMKGHFHIYLAIAAKTAGKTTTSTSIGMVIVIFFTIVHAPKVVAHIIKRARKRTPTHRMALQLLDPSSELKILLCIHGLQNTSAAISIMEISRGMAKPGVVVYLTDMIELTDEIAATLVQVEGEDTLTVTHAGVRQMRDQITAVVQSYVDENGDGITLGRMLALSAFNSMAQDICILAEELMGALIILPFHKSQRADGSLSEGNSGFRYVNRKVLRNAPCSVGILVDRGLGTVEKISRSYASLNVAVIFISGKDDREALAYAARVARHPGVKLSVIRFLVDAAAENAARRAGTYRISVAEQEEEMRLDDECFATFYERHVAGGHVAYVEKHLASSAETYSTLKLLEGQYALIIVGRGGKVNTVLTFGMNDWQQCPELGPIGDVLSGSEFSVRTSVLVIQQHNLKGELDGLDDDFSIMEMSRNR 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3190323 3194688 + CmoCh08G005090.1 Cmo08g00509 387242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00509 796 PANTHER CATION/H(+) ANTIPORTER 28 22 787 - -
Cmo08g00509 796 Pfam Sodium/hydrogen exchanger family 43 418 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo08g00509 796 Gene3D - 29 429 IPR038770 -
Cmo08g00509 796 PANTHER CATION/H + ANTIPORTER 22 787 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00509 Cmo17g00938 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00509 Cmo-Chr8:3190323 Cmo20g01059 Cmo-Chr20:9767041 7.57E-112 dispersed
Cmo17g00938 Cmo-Chr17:8326977 Cmo08g00509 Cmo-Chr8:3190323 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00509 - - csv:101211645 1370.14