Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00524 ATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGTTTTTCAATACCCTGCTGTGCAATCTTGTGTTGCTACAACTGATCTTTCTAGGGTGGCCACTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTCTTGATCCAAAACCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCAGGTGGTGCAGCTGGAGCTTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGAACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCCGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTTGCCCTTGGTTGGTTGATCACCAACGGTGCTGGCCTNNNNNNNNNNTCATTCAGTGGAAGAGAACTAACCATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGTTTTTCAATACCCTGCTGTGCAATCTTGTGTTGCTACAACTGATCTTTCTAGGGTGGCCACTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTCTTGATCCAAAACCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCAGGTGGTGCAGCTGGAGCTTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGAACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCCGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTTGCCCTTGGTTGGTTGATCACCAACGGTGCTGGCCTTGCGTCCTACCCAATTGACACTGTCCGTAGAAGAATGATGATGACATCTGGTGAAGCCGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATTCTCCGTGCTGTTGCTGGTGCTGGTGTGCTCGCCGGTTACGACAAGTTGCAGGTGATCGTGTTCGGAAAGAAATACGGATCGGGCGGTGCTTAA 2145 46.76 MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASISNYSNAVFQYPAVQSCVATTDLSRVATTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLXXXSFSGRELTMADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASISNYSNAVFQYPAVQSCVATTDLSRVATTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3276053 3279704 - CmoCh08G005240.1 Cmo08g00524 387257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00524 714 SUPERFAMILY Mitochondrial carrier 411 699 IPR023395 -
Cmo08g00524 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 516 609 IPR018108 -
Cmo08g00524 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 411 504 IPR018108 -
Cmo08g00524 714 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 313 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 Pfam Mitochondrial carrier protein 192 289 IPR018108 -
Cmo08g00524 714 Pfam Mitochondrial carrier protein 412 508 IPR018108 -
Cmo08g00524 714 Pfam Mitochondrial carrier protein 89 185 IPR018108 -
Cmo08g00524 714 Pfam Mitochondrial carrier protein 515 612 IPR018108 -
Cmo08g00524 714 Pfam Mitochondrial carrier protein 618 702 IPR018108 -
Cmo08g00524 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 617 703 IPR018108 -
Cmo08g00524 714 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 313 - -
Cmo08g00524 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 181 IPR018108 -
Cmo08g00524 714 Gene3D Mitochondrial carrier domain 91 320 IPR023395 -
Cmo08g00524 714 Gene3D Mitochondrial carrier domain 414 710 IPR023395 -
Cmo08g00524 714 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 325 714 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 531 549 IPR002067 GO:0055085
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 429 443 IPR002067 GO:0055085
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 479 499 IPR002067 GO:0055085
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 416 429 IPR002067 GO:0055085
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 582 600 IPR002067 GO:0055085
Cmo08g00524 714 PRINTS Mitochondrial carrier protein signature 626 648 IPR002067 GO:0055085
Cmo08g00524 714 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 325 714 - -
Cmo08g00524 714 PRINTS Adenine nucleotide translocator signature 457 478 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 PRINTS Adenine nucleotide translocator signature 413 425 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 PRINTS Adenine nucleotide translocator signature 516 529 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 PRINTS Adenine nucleotide translocator signature 490 502 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 PRINTS Adenine nucleotide translocator signature 622 638 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Cmo08g00524 714 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 286 IPR018108 -
Cmo08g00524 714 SUPERFAMILY Mitochondrial carrier 88 305 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00522 Cmo-Chr8:3267723 Cmo08g00524 Cmo-Chr8:3276053 0 dispersed
Cmo08g00524 Cmo-Chr8:3276053 Cmo19g01035 Cmo-Chr19:9038739 4.40E-129 dispersed
Cmo08g00523 Cmo-Chr8:3271650 Cmo08g00524 Cmo-Chr8:3276053 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00524 K05863 - csv:101203733 723.776