Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g00524 | ATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGTTTTTCAATACCCTGCTGTGCAATCTTGTGTTGCTACAACTGATCTTTCTAGGGTGGCCACTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTCTTGATCCAAAACCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCAGGTGGTGCAGCTGGAGCTTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGAACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCCGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTTGCCCTTGGTTGGTTGATCACCAACGGTGCTGGCCTNNNNNNNNNNTCATTCAGTGGAAGAGAACTAACCATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGATTCCGTGCTTGTGATGATGGCTTCAGGAACCCTGCACTTTACCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGTTTTTCAATACCCTGCTGTGCAATCTTGTGTTGCTACAACTGATCTTTCTAGGGTGGCCACTACTGCCTCCCCCATTTTTGTTGCGGCCCCTGCTGAGAAAGGAAACTTTATGCTTGACTTTCTCATGGGTGGTGTCTCTGCCGCTGTATCCAAGACAGCCGCTGCCCCAATTGAACGTGTCAAGCTCTTGATCCAAAACCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGTACAATCCAAGATGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGATAAGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCAGGTGGTGCAGCTGGAGCTTCATCCCTTCTTTTCGTTTACTCTCTTGACTATGCTCGAACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGTGGTGGAAGGCAATTCAATGGACTGGTTGATGTTTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATTTCTTGTGTTGGTATCATTGTGTACCGTGGTTTATACTTCGGTATGTACGATTCTCTGAAGCCCGTTCTCTTGACCGGAAAGTTGCAGGATAGCTTCTTCGCTAGTTTTGCCCTTGGTTGGTTGATCACCAACGGTGCTGGCCTTGCGTCCTACCCAATTGACACTGTCCGTAGAAGAATGATGATGACATCTGGTGAAGCCGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTGTTCAAGGGTGCCGGAGCTAACATTCTCCGTGCTGTTGCTGGTGCTGGTGTGCTCGCCGGTTACGACAAGTTGCAGGTGATCGTGTTCGGAAAGAAATACGGATCGGGCGGTGCTTAA | 2145 | 46.76 | MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASISNYSNAVFQYPAVQSCVATTDLSRVATTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLXXXSFSGRELTMADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRASISNYSNAVFQYPAVQSCVATTDLSRVATTASPIFVAAPAEKGNFMLDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTIQDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 714 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3276053 | 3279704 | - | CmoCh08G005240.1 | Cmo08g00524 | 387257 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g00524 | 714 | SUPERFAMILY | Mitochondrial carrier | 411 | 699 | IPR023395 | - | |
Cmo08g00524 | 714 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 516 | 609 | IPR018108 | - | |
Cmo08g00524 | 714 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 411 | 504 | IPR018108 | - | |
Cmo08g00524 | 714 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 2 | 313 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | Pfam | Mitochondrial carrier protein | 192 | 289 | IPR018108 | - | |
Cmo08g00524 | 714 | Pfam | Mitochondrial carrier protein | 412 | 508 | IPR018108 | - | |
Cmo08g00524 | 714 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
Cmo08g00524 | 714 | Pfam | Mitochondrial carrier protein | 515 | 612 | IPR018108 | - | |
Cmo08g00524 | 714 | Pfam | Mitochondrial carrier protein | 618 | 702 | IPR018108 | - | |
Cmo08g00524 | 714 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 617 | 703 | IPR018108 | - | |
Cmo08g00524 | 714 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 2 | 313 | - | - | |
Cmo08g00524 | 714 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
Cmo08g00524 | 714 | Gene3D | Mitochondrial carrier domain | 91 | 320 | IPR023395 | - | |
Cmo08g00524 | 714 | Gene3D | Mitochondrial carrier domain | 414 | 710 | IPR023395 | - | |
Cmo08g00524 | 714 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 325 | 714 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 531 | 549 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 429 | 443 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 479 | 499 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 416 | 429 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 582 | 600 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PRINTS | Mitochondrial carrier protein signature | 626 | 648 | IPR002067 | GO:0055085 | |
Cmo08g00524 | 714 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 325 | 714 | - | - | |
Cmo08g00524 | 714 | PRINTS | Adenine nucleotide translocator signature | 457 | 478 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | PRINTS | Adenine nucleotide translocator signature | 413 | 425 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | PRINTS | Adenine nucleotide translocator signature | 516 | 529 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | PRINTS | Adenine nucleotide translocator signature | 490 | 502 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | PRINTS | Adenine nucleotide translocator signature | 622 | 638 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
Cmo08g00524 | 714 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 286 | IPR018108 | - | |
Cmo08g00524 | 714 | SUPERFAMILY | Mitochondrial carrier | 88 | 305 | IPR023395 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00522 | Cmo-Chr8:3267723 | Cmo08g00524 | Cmo-Chr8:3276053 | 0 | dispersed | |
Cmo08g00524 | Cmo-Chr8:3276053 | Cmo19g01035 | Cmo-Chr19:9038739 | 4.40E-129 | dispersed | |
Cmo08g00523 | Cmo-Chr8:3271650 | Cmo08g00524 | Cmo-Chr8:3276053 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g00524 | K05863 | - | csv:101203733 | 723.776 |