Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g00562 | ATGGGGACTCCGGTGAATATCATTGTCGGATCACATGTTTGGGTTGAGGATCCTGAGGATGCTTGGATTGATGGTCAAGTTACAGATATTAGTGGAAAAAATGCCACCATAATCACCTCCATGGATAAAACTATTGTTGCGCCAATTTCGAGTGTATATCCGAAAGACACGGAGGCGCCGCCGGCTGGGGTTGACGACATGACGAAATTGGCATACCTCCATGAACCTGGAGTTTTGCATAATCTAGCATGTCGATTTTCTCTCAACGAGATATACACTTACACCGGGAATATTCTAATCGCCGTGAATCCTTTCCGGAGATTGCCGCATTTGTATGATATTCACATGATGGAGCAGTACAAAGGAGCTACATTCGGCGAGCTTAGTCCTCATCTTTTCGCAGTTGCAGATGCTTGCTATAGATCGATGATTAACGAGCAAGGAAGTCAGTCCATCTTAGTAAGTGGAGAGAGTGGTGCTGGTAAAACTGAGACAACGAAGATGCTCATGAGATATCTAGCGTTCATGGGAGGCAGATCAGATACAGAAGGAAGAACAGTCGAGCAGCAGGTTTTGGAGTCCAACCCTGTGTTGGAAGCATTTGGAAATGCCAAGACCGTCAAAAACAACAATTCGAGTCGTTTTGGAAAATTTGTAGAAATACAATTTGATAAGAATTGGAAGATCTCTGGGGCTGCCATTCGTACGTACCTTCTCGAACGGTCGCGTGTTTGCCAAGTCTCGGATCCTGAGAGAAACTACCATTGTTTTTACATGCTTTGTGCAGCACCACCAGAAGATGTCAAGAAATACAAGTTAGCAGACCCAAGGACATATCGTTATCTTAATCAAACAAATTGTTACGAAGTGGCGAATGTTGATGATTCAAGAGAGTACTTGGAGACGAGAAACGCCATGGATGTTGTAGGAATCAGCCAGGATGAACAGGATGCTATATTTCGTGTTGTAGCTGCAATACTGCATCTTGGAAACATTGAATTCATGAAAGGGAAGGAATTTGACTCCTCCAAAGTGAAAGACGAGAAATCAAACTATCATCTTCAAACAGCAGCAGAGCTACTCATGTGTGATGTGAAGGCATTGGAACATTCACTCTGTCAGCGTGTCATAGTGACTCCTGATGGGAAAATTACAAAGCCATTGGACCCAGATTCAGCAGCCTTGAGTCGTGATGCATTGGCAAAAACTGTGTATTCAAGGCTGTTTGATTGGATTGTGGACAAAATTAATAGTTCAATTGGCCAAGATCCTAATGCAGCGAGCTTAATTGGTGTGCTTGATATTTATGGATTTGAAAGCTTCAAGGTCAATAGTTTTGAGCAGCTTTGCATCAACCTGACCAATGAGAAGTTGCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAAGAGGAGTACACGAAAGAAGAAATTAACTGGAGCTATGTTGAGTTTGTGGATAATCAGGATGTCCTTGATCTCATTGAGAAGAAACCTGGAGGTATCATTGCCCTGCTTGATGAAGCCTGCATGTTTCCAAAGTCGACACATGAAACATTTGCTCAAAAGATGTATCAGACGTACAAAGGACATAAGCGGTTCAGCAAGCCAAAACTTGCTCGAACAAACTTCACAATAAACCATTATGCTGGAGATGTTACATACCAAGCAGACCTATTTCTAGATAAAAACAAGGACTATGTAGTAGCAGAACATCAGGCTCTTCTGAATGCCTCACAATGCTCTTTTGTTGCAAATCTTTTCCCTCCACTTCCTCAGGAGAGCTCAAAGCAATCTAAGTTTTCCTCTATTGGTACTCGGTTCAAGCAACAACTCCAAGCTCTCATGGAAACATTGAATACTACAGAACCACATTATATCAGATGTGTGAAGCCCAACACAGTCTTGAAGCCTGGAATCTTTGAAAACTTCAATGTGTTGAACCAATTGAGATGTGGGGGAGTTCTCGAGGCAATTAGAATTAGCTGTGCAGGATATCCAACGAAAAGAACATTTGATGAGTTCCTTGATCGTTTTGGAATGCTTACTCCAGATATTTCAGACGGGACTGATGAAAAATCAGCATGCATGGCAATATGCGACAGAATGGGCTTAAAGGGTTATCAGATTGGAAAAACAAAAGTGTTTCTGAGAGCTGGACAAATGGCTGAGTTGGATGCACGACGAACTGAAATATTGGCCAATGCTGTCAGACGCATCCAGCGGCAAATTCGAACCCTTCTAACTAGGAAAGAGTTTCTCACCATGAGGAGAGCTACAATTCATATGCAGAAACATTGGAGAGCGCAACTTGCTCGTAAGCTGTATGAGAAAATGAGGAGAGAAGCTGCTTCAATCCGTATACAGAAGCATGCACGTGCTCATGCAGACAGAAAAGCTTACACAAAATTACTTGCGTCAGCTATAGTTATTCAAACTGGTATGCGAGCAATGGCCGCTAGAAATGAGTTCAGACACAGAAGAAGAACAAAGGCAGCTATTATTGTTCAGACTGAATGGCGAAGGGCATCAGCTATTTCAGCTTACAAACAGCAGCAGAAGGCAACTCTTGCCCTTCAATGCCTCTGGCGAGCTAAAGTTGCAAGGAAAGAGCTTAAAAAACTAAAGATGGCTGCAAGAGAAACAGGGGCACTCAAGGAGGCCAAGGACAAATTGGAGAAGCGTGTCGAGGAGCTAACGTGGCGCCTGGAATTTGAGAAGCACCTGAGGATGGATGTTGAAGAAGCCAAGGGGCAAGAAGTTGCAAAGTTACAAAGTGCTTTGGAAGAAATGCAAGGACAGCTGGATGAAGCCAATGCTGCAATCATACGTGAGAGAGAAGAAGCAAAATTGGCCATAGAACAAGCTCCACCGGTCATTAAGGAAGTGCCCGTGGTTGATGAGACCAAGCTGGAAATGCTGAGAAATCACAATGAAGAACTTGAGGGGGTGGTTGGAGAGCTGAAGAAGAAACTTGAGGAATTCGAAGAAAAGTTTGCTGAAGTAGAAAAGGAAAGTAAAGCTACACTCAAGGAGGCAGAAGAGGCACAATTGAAATCAATGCAGCTTCAGGAGACTATTGAGAGATTGGAATCAAATTTATCTAGCCTCGAGTCCGAGAACCAGGTTCTACGTCAGCAGGCTTTGGTTGCTGCAGACAATGAATCCCTCTCTGATGAACTGCAAGCCCTCAAGAGTAAGATCGGAAGTCTCGAGGCGGAGAATGAAGTTCTTCGCAACCGGACAGTAGTTGTTGAGCATGTGTCTATTCCTGCAGGGGTGCTTGCAGAAAGCAAGCCTTTGGATAACGGGCAGCCTTTAGATAACGGGCAGCCTTTAGATAACGGGCATATTGTGGAAGAAGAGATTAAAGCAACTACGGAGATTAAAGCAACTAAGGAACCACCTGTTGTTCCCGTCCTAGCTAAGCAAGGCTCGCTCACAGAAAAGCAACAGGAAAATCATGATGTCCTGCTCAAGTGCTTAGCAGAAGACAAACGTTTTGACAAAGGCAGACCAGTTGCAGCTTGTATTGTCTACAAGACACTTCTTCAATGGAGATCTTTTGAAGCAGATAAGACCAATATATTCGACAGAATTATTCACACAATCAGATCTTCTATAGAGAGTCAAGAAAATATCAGTGACCTTGCATATTGGCTTTCAACCACTTCTACCCTTTTCTATCTTCTTCAAAGTTCACTCAAGGCAGCCAATACAAGTACTGCAGCTTCACATCGCAACCGTACTTCCCCTTCAACCTTATTTGGTCGTATGGCATATGGTCTTCGATCATCTTCAATGGGTATGGGAATTTCCAGTGGATACAGTGGAATGGTGGGAAAGACAAACAATCAATCTAAAGTTGAAGCCAAGTACCCAGCATTGCTTTTTAAGCAACATTTGGCAGCATGCATTGAAAAATTGTTTGGGATGATACGTGATAACTTGAAGAAAGAAATTAGCCCTTTCTTGCATCTATGCATACAGGCACCAAGATCAGTGAGGGCCAGATCAATAAGAGGGTCATCTAAAAATATCCATTCAAATATTGTTGCAAAACAACAAGCATCAAGTATTCACTGGCAAAGCATTGTTAATAATCTAGACCAGACCTTGGATATAATGTCTGAAAATCATGTTCCCTCCATGATCATGAGAAAAATCTTCCTTCAGGTTTTCTCATTCATAAATGTCCAGCTCTTCAATAGCTTGTTACTACGACGTGAGTGCTGTTCCTTCAGTAATGGAGAGTACTTAAAGTTAGGTCTGCAGGAGTTGGAGCAATGGTGTACTAAAGCTACTGATACGTATGCTGGCTCTTCCTGGAATGAACTTCAACACATAAGACAGGCAGTAGGATTTCTGGTGTTACACCAGAAGTCCCAGAAAAGTTTGAATGAGATAACAGATGAATTGTGCCCGATTCTGAGCATCCCGCAAATATATCGCATAGGAACGATGTTCTGGGACGACAAATATGGAACTCAGGGGTTATCTCCTGATATAATTGGAAGAATGAGAGTCCTATTAGCAGAAGACTCCATCAACATCCCAAACAACTCTTTCCTGCTTGATGTGGATTCAAGCATACCATTTTCAATAGAAGAAGTATTCCGGTCCTTCGGCGAGGTTAACCTGTCCGATATCGACCCGCCGCCGCTCATAAGACAAAGATCTGATTTCCATTTTCTACTGCAGCAAGAAAGAGATGGCCAAACCTTTGCGTTCTGGGCAAAATTTTGA | 4749 | 42.83 | MGTPVNIIVGSHVWVEDPEDAWIDGQVTDISGKNATIITSMDKTIVAPISSVYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYDIHMMEQYKGATFGELSPHLFAVADACYRSMINEQGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSDTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLADPRTYRYLNQTNCYEVANVDDSREYLETRNAMDVVGISQDEQDAIFRVVAAILHLGNIEFMKGKEFDSSKVKDEKSNYHLQTAAELLMCDVKALEHSLCQRVIVTPDGKITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINSSIGQDPNAASLIGVLDIYGFESFKVNSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTNFTINHYAGDVTYQADLFLDKNKDYVVAEHQALLNASQCSFVANLFPPLPQESSKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLTPDISDGTDEKSACMAICDRMGLKGYQIGKTKVFLRAGQMAELDARRTEILANAVRRIQRQIRTLLTRKEFLTMRRATIHMQKHWRAQLARKLYEKMRREAASIRIQKHARAHADRKAYTKLLASAIVIQTGMRAMAARNEFRHRRRTKAAIIVQTEWRRASAISAYKQQQKATLALQCLWRAKVARKELKKLKMAARETGALKEAKDKLEKRVEELTWRLEFEKHLRMDVEEAKGQEVAKLQSALEEMQGQLDEANAAIIREREEAKLAIEQAPPVIKEVPVVDETKLEMLRNHNEELEGVVGELKKKLEEFEEKFAEVEKESKATLKEAEEAQLKSMQLQETIERLESNLSSLESENQVLRQQALVAADNESLSDELQALKSKIGSLEAENEVLRNRTVVVEHVSIPAGVLAESKPLDNGQPLDNGQPLDNGHIVEEEIKATTEIKATKEPPVVPVLAKQGSLTEKQQENHDVLLKCLAEDKRFDKGRPVAACIVYKTLLQWRSFEADKTNIFDRIIHTIRSSIESQENISDLAYWLSTTSTLFYLLQSSLKAANTSTAASHRNRTSPSTLFGRMAYGLRSSSMGMGISSGYSGMVGKTNNQSKVEAKYPALLFKQHLAACIEKLFGMIRDNLKKEISPFLHLCIQAPRSVRARSIRGSSKNIHSNIVAKQQASSIHWQSIVNNLDQTLDIMSENHVPSMIMRKIFLQVFSFINVQLFNSLLLRRECCSFSNGEYLKLGLQELEQWCTKATDTYAGSSWNELQHIRQAVGFLVLHQKSQKSLNEITDELCPILSIPQIYRIGTMFWDDKYGTQGLSPDIIGRMRVLLAEDSINIPNNSFLLDVDSSIPFSIEEVFRSFGEVNLSDIDPPPLIRQRSDFHFLLQQERDGQTFAFWAKF | 1582 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3441423 | 3451755 | - | CmoCh08G005620.1 | Cmo08g00562 | 387295 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g00562 | 1582 | Coils | Coil | 876 | 910 | - | - | |
Cmo08g00562 | 1582 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 312 | 601 | - | - | |
Cmo08g00562 | 1582 | PRINTS | Myosin heavy chain signature | 149 | 174 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | PRINTS | Myosin heavy chain signature | 482 | 510 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | PRINTS | Myosin heavy chain signature | 429 | 457 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | PRINTS | Myosin heavy chain signature | 196 | 223 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | ProSiteProfiles | IQ motif profile. | 853 | 882 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 781 | 803 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 756 | 778 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 804 | 826 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 852 | 874 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 829 | 851 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | iq_5 | 733 | 755 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | Pfam | Myosin head (motor domain) | 64 | 719 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | PANTHER | MYOSIN | 19 | 1565 | - | - | |
Cmo08g00562 | 1582 | Gene3D | - | 667 | 729 | - | - | |
Cmo08g00562 | 1582 | Gene3D | - | 439 | 623 | - | - | |
Cmo08g00562 | 1582 | Coils | Coil | 972 | 1048 | - | - | |
Cmo08g00562 | 1582 | SMART | DIL_2 | 1389 | 1496 | IPR002710 | - | |
Cmo08g00562 | 1582 | Coils | Coil | 1055 | 1082 | - | - | |
Cmo08g00562 | 1582 | CDD | MYSc_Myo11 | 76 | 719 | IPR036018 | - | |
Cmo08g00562 | 1582 | Gene3D | Kinesin motor domain | 65 | 662 | IPR036961 | - | |
Cmo08g00562 | 1582 | ProSiteProfiles | Dilute domain profile. | 1199 | 1514 | IPR002710 | - | |
Cmo08g00562 | 1582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 39 | 785 | IPR027417 | - | |
Cmo08g00562 | 1582 | ProSiteProfiles | IQ motif profile. | 805 | 834 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | ProSiteProfiles | IQ motif profile. | 757 | 786 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | Pfam | DIL domain | 1390 | 1493 | IPR002710 | - | |
Cmo08g00562 | 1582 | Pfam | IQ calmodulin-binding motif | 758 | 777 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | Pfam | IQ calmodulin-binding motif | 855 | 874 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | ProSiteProfiles | IQ motif profile. | 782 | 808 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | SMART | MYSc_2a | 56 | 732 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | CDD | MyosinXI_CBD | 1150 | 1537 | IPR037975 | GO:0007015 | |
Cmo08g00562 | 1582 | Gene3D | - | 832 | 881 | - | - | |
Cmo08g00562 | 1582 | Gene3D | - | 784 | 831 | - | - | |
Cmo08g00562 | 1582 | Gene3D | - | 733 | 783 | - | - | |
Cmo08g00562 | 1582 | Gene3D | - | 252 | 310 | - | - | |
Cmo08g00562 | 1582 | Coils | Coil | 922 | 956 | - | - | |
Cmo08g00562 | 1582 | ProSiteProfiles | IQ motif profile. | 734 | 761 | IPR000048 | GO:0005515 | |
Cmo08g00562 | 1582 | PANTHER | MYOSIN-12 | 19 | 1565 | - | - | |
Cmo08g00562 | 1582 | ProSiteProfiles | Myosin motor domain profile. | 62 | 731 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Cmo08g00562 | 1582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 785 | 882 | IPR027417 | - | |
Cmo08g00562 | 1582 | Pfam | Myosin N-terminal SH3-like domain | 9 | 48 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g00562 | Cmo17g00888 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00562 | Cmo-Chr8:3441423 | Cmo12g01162 | Cmo-Chr12:10512698 | 0 | dispersed | |
Cmo17g00888 | Cmo-Chr17:8068228 | Cmo08g00562 | Cmo-Chr8:3441423 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g00562 | K10357 | - | csv:101207221 | 2821.57 |