Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00578 ATGATTATCACCGTGAAGGATTCGACGATGGTGAGACCGGCGGCGGAGACACCGCGCCGGAGTCTCTGGAACTCGAACGTGGATCTGGTGGTGCCGAGTATCCACACGCCGAGCGTCTACTTCTACCGACCAACCGGTGCTTCCAATTTCTTCGACAGTCAGATTCTCAAGGATGGCCTAAGCAAGGCGCTGGTGCCGTTCTATCCAATGGCTGCACGGTTACGGCGCGATGAGGACGGTCGAATCGAGATCGATTGTAACGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACGACGGCGGTTATCGATGATTTCGGTGATTTCACGCCGACGTTGCGGCTCCGACAACTTATTCCGGCCGTCGATTATTCCGGCGGAATCGAATCGTATCCGTTGTTGGTGTTACAGGTGACTCACTTCAAATGCGGAGGAGTTTCACTCGGCGTTGGGATGCAACACCACCTAGCCGATGGCTTCTCTGGTCTCCACTTCATCAACACTTGGTCCGACATGTCGCGCGGCCTCGACCTGAAGCTCTCACCATTCATCGACCGGAGCCATCTCCGAGCACGGGAGCCACCTCAACCAATTTTTCGACATGTCGAATACCAACCAGCTCCGCCCATGAAGACCCCGGTCGAACCCGACCCAGAAGGTACCACCGTCTCCACCTTCAAATTGAGCCGCGAGCAGCTCAATCTACTCAAAGCCAAATCCAAGGAAAACGGCAACACTACCAACTACAGCTCCTACGAGATGCTCTCTGCCCACGTCTGGCGGTGCACGTGCAAGGCACGTAACCTGCCGGAGGATCAGGACACTAAGCTCTACATTCCCACCGACGGCCGTGCCCGGTTACGCCCGCCGCTTCCCAACGGCTACTTCGGTAACGTAATCTTCACGGCGACGCCGGTAGCCGTCGCAGGGGAACTGATGTCGAAACCGACATGGTTCGCCGCTAGCAAGATCCACGAAGCTTTGATTCGGATGGACAACGATTATTTGAGATCAGCTTTGGACTATCTCGAGGTTCAGCCGGACTTATCGGCGTTGGTTCGTGGGGCTCATACTTTCCAGAATCCGAATTTGGGGATCACGAGCTGGGTCCGGCTTCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGGTTTTTATGGGCCCTGGCGGAATTGCGTACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGACGGCAGCTTATCGGTTAACCGGAGGACTGTTACAGACGGCGGTGGATTTTTCCGGTACGGCGGAAGAAGTTTGAAAGAATGA 1299 55.89 MIITVKDSTMVRPAAETPRRSLWNSNVDLVVPSIHTPSVYFYRPTGASNFFDSQILKDGLSKALVPFYPMAARLRRDEDGRIEIDCNAEGVLLVEAETTAVIDDFGDFTPTLRLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHLADGFSGLHFINTWSDMSRGLDLKLSPFIDRSHLRAREPPQPIFRHVEYQPAPPMKTPVEPDPEGTTVSTFKLSREQLNLLKAKSKENGNTTNYSSYEMLSAHVWRCTCKARNLPEDQDTKLYIPTDGRARLRPPLPNGYFGNVIFTATPVAVAGELMSKPTWFAASKIHEALIRMDNDYLRSALDYLEVQPDLSALVRGAHTFQNPNLGITSWVRLPIHDADFGWGRPVFMGPGGIAYEGLSFIIPSASDDGSLSVNRRTVTDGGGFFRYGGRSLKE 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3539152 3542971 - CmoCh08G005780.1 Cmo08g00578 387311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00578 432 Gene3D - 1 205 IPR023213 -
Cmo08g00578 432 Pfam Transferase family 2 411 - -
Cmo08g00578 432 Gene3D - 210 414 IPR023213 -
Cmo08g00578 432 SUPERFAMILY CoA-dependent acyltransferases 199 411 - -
Cmo08g00578 432 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 409 - -
Cmo08g00578 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 409 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00578 Cmo17g00626 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00578 Cmo-Chr8:3539152 Cmo10g00039 Cmo-Chr10:194699 7.01E-84 dispersed
Cmo16g00561 Cmo-Chr16:2741261 Cmo08g00578 Cmo-Chr8:3539152 6.72E-28 dispersed
Cmo01g01531 Cmo-Chr1:11828449 Cmo08g00578 Cmo-Chr8:3539152 6.60E-17 wgd
Cmo17g00874 Cmo-Chr17:7979143 Cmo08g00578 Cmo-Chr8:3539152 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00578 K13065 - csv:101214857 758.829