Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00631 ATGGCCATGGCGACTTGGAATCAAACTCCCTTTGATTGCTTCATCATCCTGCTTTTGCTTGTAGCGCTTTCAAACGCTCATTCTGATGTATTGACACAAGGCCAGGAACTAACACCTGGGTCTTGGCTAATCTCAGCCACAGGGGCTTTATCCCTCGGGTTTTACAGTCCTAGTCTACTCAACAACAGTCACATAGCCATTTGGTATGAAGGAGATCCAAAGAACCCAGTGTGGATAGCCAATCCAAATTTTGCATTTCCCGGAGATTTTGGGATGCCCTGTCTCACAATCGACAGCAACGGCAGCTTGAAGATTGTACCTAAACAAAGAAATGGACATGCCTATAGTTTCTATCTCTATGAAGCTGAAGAGCCCATGAACAGCAGCGCCATGCTACTCGACAATGGCAATTTTATATTAGGTGTGTTGAATCCTGATGGGTCAATCAAGCAACAGCTATGGCAGAGCTTTGATCATCCAACCGACACTCTTCTACCTGGGATGAAAATTGGGATCAATCATAAAACTGGATCTACTTGGTCTATAACATCACAAAGAGGAGATTATTCTGTTCTATCAGGGTCTTTCACACTCACAATGAATCCCAACAATACAAACCAGTTACTGATATTACATAGAGGAGCTATTTTCTGGACTAGTGGAAACTGGCGGGATGGCCGGTTTGAATTCTCAGAAGAACTTTCAAGCATCAACAATCAAGAATTCGTGTTCAGGCGATTTTCGAATGAGAATGAGACCTTCTTCAATTACTCAACCTCCAACTTGAACAATGGAGTGATTGAAATTCAACCCCGGTTGAGATTGGTAAACGATGGAAAATTGGTGGGGAGTAATTGGGATTTGAAAGTTGAATGTCCCTATTTTGAGAACGAGTTGTTTGAGGTGGCTAAGGGTGTTTCTGGAGATGGGTGTGTGGGGAAGAAGCAGCACAAAGTACCAGAATGTCGAAATCCGCCGAAACGATTTTCAACCACACAGAGATTTGGTAACATGGAGAGAAATAGTTTGAGATACAGTGACAGTGAGAATCTCACAATTTATGATTGTGAAAAGATTTGCATTTCAAGCTGTGGTTGCATAGCTTTTAGTTCTACGAATGAAGAAGGCACTGGCTGTGAGACATGGAATGTGGGAGCAATGTTTGTTCCTGGGAAGGGAAGCAAGCGGATTATTTGGTCCATTCAGGAGACTGAAGGGAAAGTTCCTGCAGGAAAAAAAAGGGTATGGTTGGAAGTTACAATCGGCGTAATAGTACCTACAACTCTTCTCCTATTGTGTTTTATTTTCTATCTCAAATCGAAAACACAAATCCACAAAGCTGTAAGAAAACTAAGGAGGAAGGATTCAGAGCATCAAAATGTTCTACAAGAAATGGGGGCCAAATCTAAAAGTTCTAACATTCTGAAAACTAAGAACAAGCAGAGAAGAGACATAAAGAACTCCGAACTGCAGTTCTTCACATTTGAAAATGTAGTTTCTGCAACAAATAATTTCGCTGACAATTGTAGGCTGGGAGAAGGTGGTTTTGGACCCGTTTATAAGGGAAGTTTGGATGATGGCCAAGAAGTTGCTATTAAGAGACTGTCAAAGAAATCCGGACAAGGACAAGAGGAGTTTAAGAATGAAGCCATGCTGATTGCCAAACTGCAACACACTAATCTGGTTAGGCTTATTGGTTGCTGCATTCATAAAGAAGAGAGATTATTGGTGTACGAGTACATGCCCAACAAAAGCCTTGACTCCTTCCTCTTTGATCCAGTGAGAAATTTAGTACTAGATTGGGACAAACGCCTGCACATAATCCAAGGGATAATTCAAGGACTACTTTACCTTCACACCTATTCTAGATTACGAATAGTTCATCGAGATTTAAAAGTTAGCAACATCTTGCTTGATGATGAGATGAATGCAAAAATATCGGATTTTGGCATGGCTAGAATCTTTAAGCCCACGGAACAAGAAGCAAATACTAGTCGCATTGTTGGTACATATGGTTATATATCACCTGAATTTGTAATGGGCGGTACTTTCTCGATAAAATCAGATGTCTACAGCTTTGGAGTGTTGTTATTAGAGATCATAACAGCTCAAAAAAACTACCACAATTATGACGTTGGACGGCCTATCAATCTCATAGGACATGCATGGGAACTGTGGATGGAAGGCAGAGGAGAAGAACTGATCGATTCAACTTTGTACAACTCCGATCAGAAACAGAAAGCTCTAAGATGCATCCATGTTAGTCTTCTATGCGTCCAACAAATGCCAGCAGATAGACCTACCATGCTTGATGTTCATTCCATGATTCTTAATGATACTACTCAACTTCCATTGCCTAAACAGCCTCCATTTTTCATCACCCAGAACGCCAAATTGGAAGGGATGATAGATGGCACAGAGATCAAATCGGAATCAACAACAGAAATACGTTCTTCGAATAACATGTCAGTCTCTATTATGGTTGCCAGATGA 2493 41.08 MAMATWNQTPFDCFIILLLLVALSNAHSDVLTQGQELTPGSWLISATGALSLGFYSPSLLNNSHIAIWYEGDPKNPVWIANPNFAFPGDFGMPCLTIDSNGSLKIVPKQRNGHAYSFYLYEAEEPMNSSAMLLDNGNFILGVLNPDGSIKQQLWQSFDHPTDTLLPGMKIGINHKTGSTWSITSQRGDYSVLSGSFTLTMNPNNTNQLLILHRGAIFWTSGNWRDGRFEFSEELSSINNQEFVFRRFSNENETFFNYSTSNLNNGVIEIQPRLRLVNDGKLVGSNWDLKVECPYFENELFEVAKGVSGDGCVGKKQHKVPECRNPPKRFSTTQRFGNMERNSLRYSDSENLTIYDCEKICISSCGCIAFSSTNEEGTGCETWNVGAMFVPGKGSKRIIWSIQETEGKVPAGKKRVWLEVTIGVIVPTTLLLLCFIFYLKSKTQIHKAVRKLRRKDSEHQNVLQEMGAKSKSSNILKTKNKQRRDIKNSELQFFTFENVVSATNNFADNCRLGEGGFGPVYKGSLDDGQEVAIKRLSKKSGQGQEEFKNEAMLIAKLQHTNLVRLIGCCIHKEERLLVYEYMPNKSLDSFLFDPVRNLVLDWDKRLHIIQGIIQGLLYLHTYSRLRIVHRDLKVSNILLDDEMNAKISDFGMARIFKPTEQEANTSRIVGTYGYISPEFVMGGTFSIKSDVYSFGVLLLEIITAQKNYHNYDVGRPINLIGHAWELWMEGRGEELIDSTLYNSDQKQKALRCIHVSLLCVQQMPADRPTMLDVHSMILNDTTQLPLPKQPPFFITQNAKLEGMIDGTEIKSESTTEIRSSNNMSVSIMVAR 830
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3836941 3840380 - CmoCh08G006310.1 Cmo08g00631 387364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00631 830 Gene3D Phosphorylase Kinase; domain 1 463 580 - -
Cmo08g00631 830 ProSiteProfiles Protein kinase domain profile. 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g00631 830 CDD STKc_IRAK 511 776 - -
Cmo08g00631 830 SMART serkin_6 505 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g00631 830 Gene3D - 22 158 IPR036426 -
Cmo08g00631 830 PIRSF SRK 1 296 IPR024171 GO:0004674
Cmo08g00631 830 PIRSF SRK 291 830 IPR024171 GO:0004674
Cmo08g00631 830 Pfam PAN-like domain 349 383 IPR003609 -
Cmo08g00631 830 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Cmo08g00631 830 Pfam D-mannose binding lectin 76 186 IPR001480 -
Cmo08g00631 830 SMART blect_4 28 160 IPR001480 -
Cmo08g00631 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 224 IPR036426 -
Cmo08g00631 830 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE 76 794 - -
Cmo08g00631 830 Pfam Protein tyrosine and serine/threonine kinase 510 773 IPR001245 GO:0004672|GO:0006468
Cmo08g00631 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Cmo08g00631 830 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Cmo08g00631 830 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 794 - -
Cmo08g00631 830 SUPERFAMILY Protein kinase-like (PK-like) 489 795 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00631 Cmo-Chr8:3836941 Cmo18g00314 Cmo-Chr18:2010095 2.59E-136 dispersed
Cmo17g00773 Cmo-Chr17:7490373 Cmo08g00631 Cmo-Chr8:3836941 1.03E-96 dispersed
Cmo08g00631 Cmo-Chr8:3836941 Cmo09g00901 Cmo-Chr9:4698818 1.40E-159 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74525 PF07714 PK_Tyr_Ser-Thr 2.90E-47 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00631 - - csv:101221041 1303.89