Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g00682 | ATGGCTTGGTTCACCATTGGAAGCTTCCAAGATTCCTTTAGCTTGCGCTCTTGCAAGGCGTATCTTGCTGAGTTCATCTCCACCTTGCTCTTCGTTTTCGCCGGCGTCGGTTCCGCCATTGCCTACGATAAAATAACATCCTCTGCAGCTTTGGACCCAGCGGGGCTGGTGGCGGTGGCGGTTTGCCATGGATTTGCTCTGTTTGTTGCAGTCTCTGTCGGAGCCAACATCTCCGGTGGCCATGTCAACCCAGCGGTGACATTCGGCCTTCTTCTTGGTGACCAAATCAGCCTAATTACGACCATATTTTACTGGATTGCTCAGCTTCTTGGCTCCATTGTCGCCTGCTACCTTCTCAAATATGTTACTGGCGGCCTGGCAGTTCCGGTCCACAGCGTGGCGGCCGGCATCGGAGCAGCGGAAGGAGTTGTGATGGAAATTGTCATCACATTCGGTCTGGTTTACACGGTCTATGCGACGGCGGCCGACCCAAAGAAGGGATCTTTGGGCACAATTGCGCCAATTGCCATCGGATTCATCGTCGGAGCAAACATTTTGGCAGCCGGACCGTTTTCCGGCGGATCGATGAACCCGGCCCGGTCATTTGGACCGGCGGTGGTCAGTGGGGACTTTCACGACAACTGGATTTACTGGGTTGGGCCACTCGTTGGCGGTGGCTTAGCTGGGCTTATCTACTTTTATGCCTTTATGGCCTATGGGCCCAGCCCAATTCCAAGCGATTACTAA | 747 | 54.08 | MAWFTIGSFQDSFSLRSCKAYLAEFISTLLFVFAGVGSAIAYDKITSSAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLLLGDQISLITTIFYWIAQLLGSIVACYLLKYVTGGLAVPVHSVAAGIGAAEGVVMEIVITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLVGGGLAGLIYFYAFMAYGPSPIPSDY | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4365247 | 4366658 | - | CmoCh08G006820.1 | Cmo08g00682 | 387415 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g00682 | 248 | Gene3D | Glycerol uptake facilitator protein. | 2 | 240 | IPR023271 | - | |
Cmo08g00682 | 248 | PANTHER | AQUAPORIN-8 | 1 | 248 | IPR034294 | - | |
Cmo08g00682 | 248 | Pfam | Major intrinsic protein | 15 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | ProSitePatterns | MIP family signature. | 81 | 89 | IPR022357 | - | |
Cmo08g00682 | 248 | SUPERFAMILY | Aquaporin-like | 14 | 242 | IPR023271 | - | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 19 | 38 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 63 | 87 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 100 | 119 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 145 | 163 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 178 | 200 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PRINTS | Major intrinsic protein family signature | 215 | 235 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | PANTHER | MIP PROTEIN | 1 | 248 | - | - | |
Cmo08g00682 | 248 | CDD | MIP | 19 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo08g00682 | 248 | TIGRFAM | MIP: MIP family channel proteins | 23 | 232 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g01579 | Cmo-Chr2:9115713 | Cmo08g00682 | Cmo-Chr8:4365247 | 1.37E-126 | dispersed | |
Cmo08g00682 | Cmo-Chr8:4365247 | Cmo14g00225 | Cmo-Chr14:1039713 | 3.39E-95 | dispersed | |
Cmo08g00682 | Cmo-Chr8:4365247 | Cmo03g01198 | Cmo-Chr3:9354988 | 1.59E-99 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g00682 | K09873 | - | csv:101218611 | 460.685 |