Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g00748 | ATGAAAATCGAGTCGATGAGACGGGGAAGGATAAGGGAGAGGATCCGGCGGAGCCATCTCTATACATTCGGTTGCATCCGGTCACAGAGTGCATATGAGGCCGATGATTCGAATCCATTAACAGGACCTGGTTTTTCACGAATTGTCTGTTGTAACCAACCTCATCTCCATGAGAGGCAGCCATTGAAATACTGCTTCAATTACATATCCACAACCAAGTATAATGTTCTTACTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCAGGAGAGTTGCCAATTTGTACTTTCTTTTGGCTGCATTGTTGTCCCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTCTGGTATTTGTTGTTGGTCTCAGTATGGCTAAAGAAGCTCTCGAGGACTGGAGTCGATTCGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGATTGTTCATAAAGGGGATGGTGTTTTTGGTCATAGACCTTGGCACAAGATTCGTGTAGGAGACATAGTGAAAGTAGAGAAGGATCAGTTCTTTCCCGCTGATCTACTTCTTTTGTCGTCGTGCTATGAGGACGGTATATGTTACGTGGAAACGATGAATTTGGATGGCGAGACTAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCTACCTTCAAAGACTTTACTGGAAAGATTTACTGTGAAGATCCAAACCCAAATCTTTACACATTTGTTGGTAACTTGGAGTATGATCGGCAGATTTATCCTCTTGATCCTAGCCAGATTCTCCTCAGAGATTCTAAATTGAGGAACACAGCTTATGCCTACGGGGTAGTGATATTTACTGGACATGATAGTAAAGTCATGCAGAATGCTACAAAATCTCCTTCCAAAAGAAGTAGAATAGAGAGAAAAATGGACAAGATTATTTACATCCTTTTTACCTTACTTGTATTGATATCATCAATGAGCTCAATAGGTTTTGCTGTGAAGACAAAGTACCAAATGACTGACTGGTGGTATTTACAAACTACTGGTGATGATCCACTGTATAACCCTCGTCAGCCAACCTTATCAGGGCTCATACATTTGATCACTGCTCTTATACTCTATGGATATTTGATACCGATCTCGCTCTATGTTTCCATCGAGGTTGTTAAGGTTCTACAAGCTTCCTTCATTAACCAAGATATTAACATGTATTGTGAAGAGACTAGTAATCCCGCTCGAGCTCGGACTTCAAATTTGAACGAGGAGTTGGGTCAGGTAGACACGATCCTATCCGACAAAACTGGCACTTTGACTTGTAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGGACTGCGTATGGTGTTAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGACCTTGACGAGCAGGATGCAGATTATTCTGATGTTGTTGTGCAAAAAAATAGCCGACAGTCTTCCATGGCATGGGACCGAAAAGAATCGGAGATTGAATTGGAGACTGTTCTTACTTCAAGTGTTGTCAAAGAGCAGAAGTCTGCCATAAAGTATTTTGGTTTTGAGGACAGCCGTTTAACAAATGGAAACTGGTTGAATGAGCCTAATCATGATGTTCTTCTATTGTTCTTCAGAATTTTAGCAATTTGTCACACTGCAATTCCTGAGCTGAATGAGGAAACTGGTGCTTTTACTTATGAAGCAGAGTCCCCTGATGAAGGTGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAGTTTTGTAAGAGAACACAATCAACCTTGGTTGTGCGTGAAAGATATCCTTCTCCTAACCAAGTAGTTGAAAGGGAATACAAAGTTTTAAATCTTTTGGATTTCACTAGCAAGAGAAAGAGAATGTCTGTAATTGTTAGGGATGAGTATGGCCATATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGATCGACTATCGAAGAACGGAAGAATGTATGAGGAAGCAACCACAAGGCATTTGAATGAATATGGAGAAGCTGGGTTGCGTACTCTGGCACTTGCTTATAGAAAGCTTGAGGAGTCCGAGTATACTGCTTGGAACAACGAGTTTCAGAAGGCTAAAACGTCCATTGGAGGAGATAGAGATGCAATGCTCGAGCGAGTGTCCGACCTCATGGAACGAGAATTAACCCTTGTTGGTGCTACCGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATTGATAAACTTGCACAAGCTGGCCTTAAGATCTGGGTTTTGACTGGAGATAAAATGGAAACTGCCATCAACATTGGATATGCATGCAGTTTACTTCGACAGGGAATGAAGCGGATTTGCATATCAACAAGCTCAGATTCTTTAGCTCAGGAAGGAAAAGAGGCCATGAAAGAATATATTTTGAATCAAATCACCAACGCCTCGCAAATGATCAATCTGGAGAAGGATCCACACGCTGCATTCGCTTTAATCATTGATGGGAAGACTCTAACATATGCTCTCGAAGATGATATGAAGTTTCAATTCCTTGGACTCGCTGTTGATTGTGCATCGGTCATTTGCTGTCGTGTCTCCCCCAAGCAAAAAGCCCTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTGGCAATTGGTGATGGCGCAAACGATGTGGGAATGATTCAAGAGGCCGATATTGGTGTCGGTATCAGCGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATTGCCCAATTTCGGTTTCTTGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATAGCGCAAATGATATGCTATTTCTTCTACAAGAATATCGCATTCGGATTAACGCTGTTCTACTTCGAAGCATACGCGGGATTTTCTGGGCAATCAATATATGATGATTTCTACATGCTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAACAAGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCACTCTATCAGCAAGGCCCCCAAAACTTGTTCTTCGACTGGCCTCGGATTTTCGGATGGATGGGGAATGCTGTCTACTCCTCTATAGTTACTTTCTTCCTCAATCTCATCATCTTCTACGACCAGGCATTCCGCTCAGGCGGCCAAACTGCCGACATGACTGCTGTCGGAACCACCATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATCGCTCTAACAATGAGCCACTTCACCTGGATCCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGGTAATATCCTCTGGAAATGCATATAAAATATTCGTTGAAGCCTTAGGACCTGCCCCTGTTTACTGGGTAGCCACCATCTTAGTAACAATTACCTGCAATCTCCCATATCTTGCCCATATATCCTTCCAAAGAAGCTTCCATCCAATGGATCATCACATAATCCAAGAAATCAAATACTACCGAAAGGATGTGGAAGACACACACATGTGGACCAGGGAAAGATCAAAAGCAAGGCAAAAAACCAAGATAGGATTCACAGCCAGAGTAGAAGCTAAGATCAGGCAGCTAAAAGGAAAGCTCCAAAAGAAGCACTCTTCCCTTGGAGCTCCTCCAACTGGTACTATTTCATGA | 3696 | 42.61 | MKIESMRRGRIRERIRRSHLYTFGCIRSQSAYEADDSNPLTGPGFSRIVCCNQPHLHERQPLKYCFNYISTTKYNVLTFLPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWSRFVQDMKVNLRKVIVHKGDGVFGHRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNLEYDRQIYPLDPSQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLVLISSMSSIGFAVKTKYQMTDWWYLQTTGDDPLYNPRQPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEETSNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDLDEQDADYSDVVVQKNSRQSSMAWDRKESEIELETVLTSSVVKEQKSAIKYFGFEDSRLTNGNWLNEPNHDVLLLFFRILAICHTAIPELNEETGAFTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPNQVVEREYKVLNLLDFTSKRKRMSVIVRDEYGHIILLCKGADSIIFDRLSKNGRMYEEATTRHLNEYGEAGLRTLALAYRKLEESEYTAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISTSSDSLAQEGKEAMKEYILNQITNASQMINLEKDPHAAFALIIDGKTLTYALEDDMKFQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPQNLFFDWPRIFGWMGNAVYSSIVTFFLNLIIFYDQAFRSGGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMVISSGNAYKIFVEALGPAPVYWVATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKYYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGKLQKKHSSLGAPPTGTIS | 1231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4733146 | 4738116 | + | CmoCh08G007480.1 | Cmo08g00748 | 387481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g00748 | 1231 | Gene3D | - | 426 | 440 | IPR023214 | - | |
Cmo08g00748 | 1231 | Pfam | Cation transport ATPase (P-type) | 554 | 658 | - | - | |
Cmo08g00748 | 1231 | PRINTS | P-type cation-transporting ATPase superfamily signature | 429 | 443 | - | - | |
Cmo08g00748 | 1231 | PRINTS | P-type cation-transporting ATPase superfamily signature | 887 | 906 | - | - | |
Cmo08g00748 | 1231 | SUPERFAMILY | HAD-like | 417 | 931 | IPR036412 | - | |
Cmo08g00748 | 1231 | Gene3D | - | 441 | 489 | IPR023299 | GO:0000166 | |
Cmo08g00748 | 1231 | Gene3D | - | 598 | 731 | IPR023299 | GO:0000166 | |
Cmo08g00748 | 1231 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 859 | 968 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo08g00748 | 1231 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 363 | 477 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo08g00748 | 1231 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 64 | 1171 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cmo08g00748 | 1231 | SFLD | p-type atpase | 413 | 938 | IPR044492 | - | |
Cmo08g00748 | 1231 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 431 | 437 | IPR018303 | - | |
Cmo08g00748 | 1231 | MobiDBLite | consensus disorder prediction | 1212 | 1231 | - | - | |
Cmo08g00748 | 1231 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 915 | 1163 | IPR032630 | - | |
Cmo08g00748 | 1231 | Gene3D | - | 732 | 927 | IPR023214 | - | |
Cmo08g00748 | 1231 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1223 | - | - | |
Cmo08g00748 | 1231 | CDD | P-type_ATPase_APLT_Dnf-like | 67 | 1046 | - | - | |
Cmo08g00748 | 1231 | SFLD | Haloacid Dehalogenase | 413 | 938 | - | - | |
Cmo08g00748 | 1231 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1223 | - | - | |
Cmo08g00748 | 1231 | SUPERFAMILY | Calcium ATPase, transduction domain A | 152 | 294 | IPR008250 | - | |
Cmo08g00748 | 1231 | Gene3D | - | 125 | 297 | - | - | |
Cmo08g00748 | 1231 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 530 | 693 | IPR023299 | GO:0000166 | |
Cmo08g00748 | 1231 | Pfam | Phospholipid-translocating ATPase N-terminal | 51 | 116 | IPR032631 | - | |
Cmo08g00748 | 1231 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 61 | 1159 | IPR023298 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g00748 | Cmo-Chr8:4733146 | Cmo18g00028 | Cmo-Chr18:119077 | 0 | dispersed | |
Cmo17g00688 | Cmo-Chr17:7022461 | Cmo08g00748 | Cmo-Chr8:4733146 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g00748 | K01530 | - | csv:101221220 | 2291.92 |