Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00824 ATGTCGTTGAGTACTGAAATCGAAAGCCTCTGGGTCTTCGCTTTGGCTTCTAAATGCTCTCCTCTCACCCAACCCAACATCCTTTACTTCTTCCTCTTCCTATGCCTAATTTGGTTTCTTGTTTCCATTTTCCATTGGGCCCATCCTGGCGGCCCTGCTTGGGGCCGCCACCCACGGTGCCGCCGCAATTCCCCTCTCTCCACCACCACCACCACCATCCCTGGCCCAAGAGGCCTCCCCGTCATCGGTAGCATGACCCTCATGACTGGACTGGCCCACCACCGAATAGCCGCCATGGCCAAATCCCTAGGCGCCACACGACTCATGGCCTTCTCACTCGCCAACACTCGCGTGATTGTCACGTGTAACCCGGATGTGGCTAAAGAAATCCTCAACAGCTCGGTCTTTGCGGACCGTCCGATTAAGGAATCTGCCTACTCCTTGATGTTCAATCGCGCCATTGGATTTGCCCCTTATGACGTCTATTGGCGGACACTCCGACGTATTGCTTCACAACATCTCTTCTGTCCTAAACAAATTAAATCCTCCGAATTCCAACGCCGCCAAATCGCTTCCCAAATGGTCGCAATCTTCGCTAACAACAACAACACCTCGTCTCGTCACCAAGTTCGTGACACGCTCAAGCGAGCCTCTTTGAACCACATGATGGGCTCAGTCTTCGGCCAGGCTTACAATCTCTCGGACTCAAATAATGAAATCGAGCAACTCAAGAGCCTCGTCGACGAAGGTTACGATTTATTGGGCCTTCTCAACTGGTCCGACCATCTCCCCTTTTTGGGTGATCTCGACCCACAGCGAATCCGGTTCAGATGCTCCCGGTTGGTCCCCAAAGTGAACCGGTTTCTAAACCGGATCATCGCCGATCACCGGTCCAAATCAACCCAACAAATCATGGATTTTGTCGACGTTCTTCTCTCTCTTCAACAAACCGAAAATCTCTCCGATTCCGATATCATCGCCGTTCTTTGGGAAATGATATTTAGAGGGACGGACACGGTGGCTGTGTTGATAGAGTGGACCCTAGCGAGGATGGTGGTTCACAAGGAGGAGCAGGAGAAAGTACAAGAGGAATTAGATAAAGTGGTTGGTAGATCACGCGCCGTCGTGGAATCCGACATTCCGTCGTTGGAATATCTAACGGCGGTGGTTAAGGAAGTTCTGAGGCTACACCCACCTGGGCCTCTTCTATCATGGGCCCGATTAGCCAGAAGTGATACAATGGTGGATGGGCATCACGTGCCGCGTGGGACCACTGCAATGGTTAACATGTGGTCCATAGCACGAGACCCAGAGGTTTGGTGGAGCCCACAGGAGTTTATGCCTGAGAGGTTTGTGGGGAATAAGTGTTGTGGGGTGGAGTTTCCGATTATGGGTTCGGATCTAAGGTTGGCTCCATTTGGGTCGGGTCGAAGGAGTTGCCCCGGAAAGGCACTCGCGTGGACTACTGTAACATTCTGGGTAGCTACTCTGTTACATGAGTTTAAATGGTGGCAAAACGACGGCGTTGACTTGTGTGAGAAACTCAAGCTGTCTTGTGAGATGGCGAATCCACTGACGGTTGAAGTATCCCGACGGCGGTAA 1602 51.94 MSLSTEIESLWVFALASKCSPLTQPNILYFFLFLCLIWFLVSIFHWAHPGGPAWGRHPRCRRNSPLSTTTTTIPGPRGLPVIGSMTLMTGLAHHRIAAMAKSLGATRLMAFSLANTRVIVTCNPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYDVYWRTLRRIASQHLFCPKQIKSSEFQRRQIASQMVAIFANNNNTSSRHQVRDTLKRASLNHMMGSVFGQAYNLSDSNNEIEQLKSLVDEGYDLLGLLNWSDHLPFLGDLDPQRIRFRCSRLVPKVNRFLNRIIADHRSKSTQQIMDFVDVLLSLQQTENLSDSDIIAVLWEMIFRGTDTVAVLIEWTLARMVVHKEEQEKVQEELDKVVGRSRAVVESDIPSLEYLTAVVKEVLRLHPPGPLLSWARLARSDTMVDGHHVPRGTTAMVNMWSIARDPEVWWSPQEFMPERFVGNKCCGVEFPIMGSDLRLAPFGSGRRSCPGKALAWTTVTFWVATLLHEFKWWQNDGVDLCEKLKLSCEMANPLTVEVSRRR 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5248033 5250035 + CmoCh08G008240.1 Cmo08g00824 387557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00824 533 Pfam Cytochrome P450 74 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 Gene3D Cytochrome P450 62 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
Cmo08g00824 533 PANTHER CYTOCHROME P450 78A7-RELATED 4 533 - -
Cmo08g00824 533 SUPERFAMILY Cytochrome P450 73 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00824 533 PANTHER CYTOCHROME P450 78A6 4 533 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00824 Cmo-Chr8:5248033 Cmo13g01109 Cmo-Chr13:9082814 1.28E-174 dispersed
Cmo01g00033 Cmo-Chr1:116681 Cmo08g00824 Cmo-Chr8:5248033 3.94E-76 wgd
Cmo17g00473 Cmo-Chr17:3418249 Cmo08g00824 Cmo-Chr8:5248033 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00824 K20619 - csv:101216159 810.061