Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00869 ATGGCTTCTCTTCTTCTCTTCCTCCTCTTTGTGGTCTTCACTCTCCCATCGGTCTCCCTCGCTGTCACGAAAGCTGAAGTTTCGTATCTCATTGGTCGTCAACTTTTGGCTATAAGAGAACACGATGAACTCCCAGATAACTATAAATATGAAGTTGAAGTTGATCCTCAAGAAACTTTCTTAAATGAGAGGTTGAAGAAGGCTTTTGTTGCCCTTAAAGCTTGGAAAGCCGCCATGTATTCTGACCCATATAACTTCACTGAAAATTGGGTTGGCAATGATGTTTGTCTTTATAGGGGCGTTTTTTGTACTACGGCGCTTGATGACTCCACTGTTGAGGTTGTGGCTGGCATTGATTTGAACCATGCTGACATTGCAGGCTACTTGCCACCTGAGCTTGGACTCTTGACAGATTTGGCGTTGTTCCATATTAACTCTAATAGGTTTTGTGGGATAATTCCTCATAGCTTTTCTAAGCTCACTCTCATGTTTGAGTTTGATGTCAGTAACAACCGGTTCGTTGGCCATTTTCCAGAGGTTGTCTTTTATTGGCGTATTGCTAAGTACCTCGATCTTAGGTTCAACGACTTTGAAGGAGAAATCCCACCGGCACTCTTCACTATGACCTTCGACGCCATATTCTTAAATAACAATAGATTCAGTTCCTTCATCCCGGATACCATTGGAAACTCCACTGTCTCCGTTGTGTCCTTTGCGTACAACTACTTCCATGGCTGCATTCCAAAAACCATTGGCCAAATGAGCAGCCTTAAGCAAGTTCTCTTCATTGGCAACAACCTCGATGGCTGTCTCCCAGTCGAGCTTGGAAAGCTTGTCAATGTAACGGTGCTTGATATCAGCAACAATAGCTTTCCTGGTTGGTTGCCTGCGTTATCGGGGCTCAAGAATTTGCAGTGGCTTGATAGGTTGTGGTGA 936 44.02 MASLLLFLLFVVFTLPSVSLAVTKAEVSYLIGRQLLAIREHDELPDNYKYEVEVDPQETFLNERLKKAFVALKAWKAAMYSDPYNFTENWVGNDVCLYRGVFCTTALDDSTVEVVAGIDLNHADIAGYLPPELGLLTDLALFHINSNRFCGIIPHSFSKLTLMFEFDVSNNRFVGHFPEVVFYWRIAKYLDLRFNDFEGEIPPALFTMTFDAIFLNNNRFSSFIPDTIGNSTVSVVSFAYNYFHGCIPKTIGQMSSLKQVLFIGNNLDGCLPVELGKLVNVTVLDISNNSFPGWLPALSGLKNLQWLDRLW 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5609995 5611160 - CmoCh08G008690.1 Cmo08g00869 387602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00869 311 Gene3D Ribonuclease Inhibitor 68 309 IPR032675 -
Cmo08g00869 311 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 5 309 - -
Cmo08g00869 311 SUPERFAMILY L domain-like 76 308 - -
Cmo08g00869 311 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 5 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00869 Cmo-Chr8:5609995 Cmo12g01271 Cmo-Chr12:11268328 7.88E-105 dispersed
Cmo08g00869 Cmo-Chr8:5609995 Cmo08g00870 Cmo-Chr8:5621196 0 tandem
Cmo17g00425 Cmo-Chr17:2835184 Cmo08g00869 Cmo-Chr8:5609995 7.95E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00869 - - cmos:111464553 616.69