Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g00921 | ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGTAGGTCTGGGGAGTGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCCGTCTCTAAATAA | 747 | 61.04 | MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSDSSSPPSVSK | 248 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6007802 | 6009961 | - | CmoCh08G009210.1 | Cmo08g00921 | 387654 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g00921 | 248 | MobiDBLite | consensus disorder prediction | 189 | 248 | - | - | |
Cmo08g00921 | 248 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 234 | - | - | |
Cmo08g00921 | 248 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 18 | 1 | 234 | - | - | |
Cmo08g00921 | 248 | ProSiteProfiles | LOB domain profile. | 30 | 132 | IPR004883 | - | |
Cmo08g00921 | 248 | MobiDBLite | consensus disorder prediction | 137 | 164 | - | - | |
Cmo08g00921 | 248 | Pfam | Lateral organ boundaries (LOB) domain | 31 | 129 | IPR004883 | - | |
Cmo08g00921 | 248 | MobiDBLite | consensus disorder prediction | 136 | 166 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g00921 | Cmo17g00031 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00203 | Cmo-Chr4:1007304 | Cmo08g00921 | Cmo-Chr8:6007802 | 6.70E-47 | dispersed | |
Cmo04g01240 | Cmo-Chr4:6297067 | Cmo08g00921 | Cmo-Chr8:6007802 | 3.24E-43 | dispersed | |
Cmo08g00921 | Cmo-Chr8:6007802 | Cmo17g00032 | Cmo-Chr17:146651 | 7.49E-62 | dispersed | |
Cmo14g02043 | Cmo-Chr14:14933551 | Cmo08g00921 | Cmo-Chr8:6007802 | 7.66E-63 | wgd | |
Cmo17g00031 | Cmo-Chr17:140116 | Cmo08g00921 | Cmo-Chr8:6007802 | 2.38E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10278 | PF03195 | LOB | 1.30E-38 | No_clan | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g00921 | K21994 | - | csv:101220603 | 321.242 |