Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00921 ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGTAGGTCTGGGGAGTGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCCCATATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCCGTCTCTAAATAA 747 61.04 MSANPSTSGGGSGGGGVGLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSDSSSPPSVSK 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6007802 6009961 - CmoCh08G009210.1 Cmo08g00921 387654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00921 248 MobiDBLite consensus disorder prediction 189 248 - -
Cmo08g00921 248 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 234 - -
Cmo08g00921 248 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 234 - -
Cmo08g00921 248 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
Cmo08g00921 248 MobiDBLite consensus disorder prediction 137 164 - -
Cmo08g00921 248 Pfam Lateral organ boundaries (LOB) domain 31 129 IPR004883 -
Cmo08g00921 248 MobiDBLite consensus disorder prediction 136 166 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g00921 Cmo17g00031 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00203 Cmo-Chr4:1007304 Cmo08g00921 Cmo-Chr8:6007802 6.70E-47 dispersed
Cmo04g01240 Cmo-Chr4:6297067 Cmo08g00921 Cmo-Chr8:6007802 3.24E-43 dispersed
Cmo08g00921 Cmo-Chr8:6007802 Cmo17g00032 Cmo-Chr17:146651 7.49E-62 dispersed
Cmo14g02043 Cmo-Chr14:14933551 Cmo08g00921 Cmo-Chr8:6007802 7.66E-63 wgd
Cmo17g00031 Cmo-Chr17:140116 Cmo08g00921 Cmo-Chr8:6007802 2.38E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10278 PF03195 LOB 1.30E-38 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00921 K21994 - csv:101220603 321.242