Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00946 ATGTACACGGCGGTGCTCGCGGCGGCGCTGGTAGCTGTAGCGGCCACAGTCTGGGTGTTGAAGAATGCGAACCGGTGGATCCACGAAACCTTCCGGTTGGGTTCAAAACGGTTCAACCTCCCACCCGGGGATCTGGGCTGGCCGTTCATCGGCAACATGTGGTCCTTTCTCAGAGCTTTCAAGTCCTCTCGTCCTGATTCCTTCATGGAGTCTTTCGTCGCCAGGTATGGACGTACGGATATGTACAAATGTTTCATGTTTGGAAGTCCAAGTGTGATTGTGACATCAACTGAAGCATGCAAAAGAGTTTTGAATGACGATGATGCGTTTGGTTCAGGATGGCCTCGTTCCACCCTGAAACTCATTGGAGAGAAGTCGTTCATTGGGATTTCTTCCAAAGAACACAAGCGTCTTCGTCGTATAACTGCCGCGCCGGTCAATGGCTACGAGGCATTGGCTACGTACCTCACGTATATAGAAAATATGACGGTTGCTTCATTGCAAAAATGGCCTTCCATGGGACAAATAGAGTTCTTAACTGAGCTACGTAAGCTTACTTTCAAGATCATTATGTACATATTTCTTAGCTCGGAGAGCGAGGTGGTGATGGAGGCTTTGGAGAGAGAGTACACAACCTTGAATTATGGTGTGAGGGCTATGGCTATCAACATTCCCGGTTTTGCTTACCATAAAGCACTCAAGGCACGAAAGAACCTCGTTATGACATTTCAATCAATTGTGAGTCAGCGAAGGAAGAAAAGGGATAATGACGTGGCAACGACGAGAAGAGATATGATGGACGCTTTGCTAGATGTAGAAGATGAGAATGGTAGAAGGTTAAGTGATGAAGAAATCATTGATGTCTTGATAATGTACTTGAATGCAGGCCATGAATCTTCAGGCCATACTATGATGTGGGCAACAATTTTCCTACAACAACATCCCAATTTTCTTGGAAAGGCAAAGGCCGAGCAAGAAGAGATACTTAAAAAACGACCTCCGGGGCAGAAAGGTTTAACTCTTAAGGAAGTTCGAGAAATGGACTATCTTTCAAAGGTAATCGATGAAACACTACGAGTCGTAACATTCTCCCTCACGGTATTTCGAGAGGCAAAGCATGACGTGAACATTTGTGTATGCGTTAGTAGCTTAAACCCTGTAACTTTCTCGTTTGAAGGTTATACCATTCCAAAAGGGTGGAAAGTGCTAGTTTGGTTTCGAAGTGTTCACTATGATCCTGAAACTTATCCAAACCCTAAACAATTTGATCCTTCACGATGGGATGATTTCACCCCAAAAGCTGGTAGCTTTCTTCCATTTGGAGGAGGAAGTAGATTGTGTCCCGGAAACGATCTTGCAAAGCTAGAAATCTCCGTCTTTCTCCATTATTTTCTCCTCAATTATCGGTTGGAAAGAGATAATCCAAATAGTCCCGTGAGGTATCTACCCCACACGAGGCCTAAAGATCAGTGTTTGGCAAGGATCAAGAGAGTTGGTGCTCCATTTGATTGA 1512 44.78 MYTAVLAAALVAVAATVWVLKNANRWIHETFRLGSKRFNLPPGDLGWPFIGNMWSFLRAFKSSRPDSFMESFVARYGRTDMYKCFMFGSPSVIVTSTEACKRVLNDDDAFGSGWPRSTLKLIGEKSFIGISSKEHKRLRRITAAPVNGYEALATYLTYIENMTVASLQKWPSMGQIEFLTELRKLTFKIIMYIFLSSESEVVMEALEREYTTLNYGVRAMAINIPGFAYHKALKARKNLVMTFQSIVSQRRKKRDNDVATTRRDMMDALLDVEDENGRRLSDEEIIDVLIMYLNAGHESSGHTMMWATIFLQQHPNFLGKAKAEQEEILKKRPPGQKGLTLKEVREMDYLSKVIDETLRVVTFSLTVFREAKHDVNICVCVSSLNPVTFSFEGYTIPKGWKVLVWFRSVHYDPETYPNPKQFDPSRWDDFTPKAGSFLPFGGGSRLCPGNDLAKLEISVFLHYFLLNYRLERDNPNSPVRYLPHTRPKDQCLARIKRVGAPFD 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6154322 6158457 + CmoCh08G009460.1 Cmo08g00946 387679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00946 503 Gene3D Cytochrome P450 31 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PANTHER ENT-KAURENOIC ACID OXIDASE 2 12 491 - -
Cmo08g00946 503 PANTHER CYTOCHROME P450 26 12 491 - -
Cmo08g00946 503 Pfam Cytochrome P450 41 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Cmo08g00946 503 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo08g00946 503 SUPERFAMILY Cytochrome P450 32 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00751 Cmo-Chr3:6327666 Cmo08g00946 Cmo-Chr8:6154322 3.12E-65 dispersed
Cmo08g00946 Cmo-Chr8:6154322 Cmo19g00471 Cmo-Chr19:5629871 5.30E-169 dispersed
Cmo14g02010 Cmo-Chr14:14732173 Cmo08g00946 Cmo-Chr8:6154322 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00946 K04123 - csv:101220640 781.171