Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g00953 ATGAAAATAAAACACAGAAAACCTCAAAATTTGCCCCTTCTTCCCGTCACAAAACAGAGAAGGATGATGAACCAACCTGGGAAATGGGTGGCGCTGGTGGCGGCCATATGGATTCAGGCATTTACAGGCACGAATTTTGATTTCCCCTCTTATTCTTCCAATCTGAAGGCGGCTTTGGGGATGTCGCAGGTAGAGCTTAACTATCTGGCGGTGGCTTCTGACGTCGGTAAGGCCTTTGGGTGGTGCTCTGGCATCGCTCTCTTGTATTTTCCTTTGTGGGTGGTGATGCTCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTTCAATGGCTTCTCCTTCAAGGGATTGTATCTCTGCCTTACTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGCTGGTTTAATACGATCTGCTATGTCTCCTGCATCCAAAAGTTTCCAACCAATCGCGCGCTTGCATTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTTTACACTCTAATGGCCAATGCATTAGACCCTAATGATGCAAGCTTGTACCTTCTCCTAAATGCATTGGTTCCTCTCATAATCTCTGTCGTTACCTTCCTCCCAATCCTTCATCAGCCACCGGCTCAGCCGTCGTCTGCCGATGCCACCCGCAATGACTCCCTCACTTTCATCTGCTTATACATCACCGCAGTTATCACAGGCCTGTATCTAATCACCTTCAATTCCACGCCTTCCAGCAAGTACGGAGCCCAACTTTTGTTAGCTGGAGCTTTTGCCCTGTTACTAGTTCCTCTTTGTCTGCCAGGAATTTGGAGTACTCACAAGTGGTTGTTTCGGATCGCATCCACTGGCTTGAGCAGTGTTCTTCACTTTCGATTCAACCTTGTCAATCATGAACTTCAGCAGGAGCTCATCCCTATTGAAACAGAAAGAAGTGGCACGAAGGTCATCACCCCTTTTGATTATAAAGAGAAGGAAAGCATTTCAAGAAAGATGATGGGGAAAGAGAATTTGACCGTTCTTGAAGAAGAGCATTCAGCTAAAATGCTCATACGACGCTTGGACTTTTGGCTCTATTTTGTTGCATACTTTTGTGGTGGGACGATTGGGTTGGTTTACAGCAACAATCTTGGGCAGATCTCGCAGTCACTAGGATACAGTTCCTTAACAAGCTCACTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGCTAATCTCAGCAGGCCCAGATTTCATGCGTGAAAAGGTGCACTTCGCCAGAACGGGATGGCTAGCCCTAGCACTAGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCGAGATCGCATTACAAATTGGCACTGGCTTGATCGGTCTAAGCTCGGGATTCATGTTCTCAGCCTCGGTCTCAATCACATCAGAGTTATTCGGACCAAACAGCTCAGGCGTCAATCACAACATCCTCATCACCAACATCCCCCTCGGCTCGTTCCTCTACGGCGTCCTGGCGGCAGTTTCATACGACTCAACTGCCGGAAGTTCAAACCAAACTGCGGCGGCGCTTGGGGACGTGGTGGTGTGCATCGGCCGGAAATGCTATCTACAAACCTTCATATGGTGGGCTTGCATCTCAATCATCGGCCTCGCTTCTTGCTTCTTGCTTTTCCGACGGACGAAACCGGCATACGACCGCCATTACGAGAGTAACCCAAACAAGACATAG 1734 48.39 MKIKHRKPQNLPLLPVTKQRRMMNQPGKWVALVAAIWIQAFTGTNFDFPSYSSNLKAALGMSQVELNYLAVASDVGKAFGWCSGIALLYFPLWVVMLMAASMGFLGYGLQWLLLQGIVSLPYSMVYLLCLLAGCSICWFNTICYVSCIQKFPTNRALALSLIVSFNGVSAALYTLMANALDPNDASLYLLLNALVPLIISVVTFLPILHQPPAQPSSADATRNDSLTFICLYITAVITGLYLITFNSTPSSKYGAQLLLAGAFALLLVPLCLPGIWSTHKWLFRIASTGLSSVLHFRFNLVNHELQQELIPIETERSGTKVITPFDYKEKESISRKMMGKENLTVLEEEHSAKMLIRRLDFWLYFVAYFCGGTIGLVYSNNLGQISQSLGYSSLTSSLVTLYSSCSFFGRLISAGPDFMREKVHFARTGWLALALVPTPIAFILLAASGSEIALQIGTGLIGLSSGFMFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVSYDSTAGSSNQTAAALGDVVVCIGRKCYLQTFIWWACISIIGLASCFLLFRRTKPAYDRHYESNPNKT 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6197534 6200247 - CmoCh08G009530.1 Cmo08g00953 387686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g00953 577 Pfam Nodulin-like 28 273 IPR010658 -
Cmo08g00953 577 SUPERFAMILY MFS general substrate transporter 23 566 IPR036259 -
Cmo08g00953 577 PANTHER NODULIN-LIKE/MFS TRANSPORTER 23 573 - -
Cmo08g00953 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 573 - -
Cmo08g00953 577 Gene3D MFS general substrate transporter like domains 313 534 IPR036259 -
Cmo08g00953 577 Gene3D MFS general substrate transporter like domains 4 207 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00953 Cmo-Chr8:6197534 Cmo16g00565 Cmo-Chr16:2751710 0 dispersed
Cmo08g00953 Cmo-Chr8:6197534 Cmo02g00245 Cmo-Chr2:1149456 3.24E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g00953 - - csv:101222963 940.258