Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01033 ATGTTTAGGATTCGTGTTCAAGATAACTCGAGATTGCAGCTCGGCCACGACTGTCAAGGTTTTCGAATGTTGTTACAGTTCCTCCGAGAAAAAAAGAGGTATTTTTCAACCCAAGATATGGCCGGTGAGGTAGCGGTAGAGGGTGCTGCGGCGGCGACTGAAGTACCCGATTCCAATCAGCAGTCCCACAAATTAGAGAGAAAATGGACCTTTTGGTTTGATAATCAGTCGCGGCCGAAGCAAGGCGCCGCTTGGGGCTCCTCTCTGCGCAAGGTCTATACCTTCGACACCGTCGAGGAATTTTGGTGTTTGTACGATCAGATACCAAAGCCGAGCAAGTTGCCGGCCAATGCAGATTTTCACTTGTTCAAATCTGGAGTTGAGCCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAATCTTGATAGCATGTGGCTGGAAACGTTGATGGCTTTAATTGGGGAACAATTCGAGGAATCTGATGAGATTTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCAGGACAAACTTGCATTATGGACAAAGAATGCAACAAATGAGGCTGCTCAGATGAGCCTTGGTAGGAAATGGAAGGAGATCATCGACGTCACCGACAAGATTTCCTTCAGCTTTCATGTAAGCATCAGGAAAAGTCGGCAAAATCTCGATACAGTGTCTGATCATCAACTAGATCCTGTTGCCGTGCTAAATTTTGAGGAAAATACTAAAAATGTTATTTCGACATACTTGTCATTGTTGTTATATTTCCTTCTTTTGTTGGCTTTGTTTTCGGATCCAAGACAATCGATTCAGATCTTCCATGCTTTGAATGCCCAGAATTTTACTTCCATTTATTTGTTGGAACATACCCATCTAGAAGTGAATCAATATACTGAAATTATTGTATTGTATGATTCCATAATCACATCTCATAGAGCAGATTTATGGGGAGGAGGGCTGTCTCATTTGGTTGAATATTTTGATTTGTTCTTTACTGCTTTGCCAGAATTACAGAAGAATGAAGCACTTCCTGTGTCTAAAGAGAGAGCATACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGCAGAGATGA 1125 43.11 MFRIRVQDNSRLQLGHDCQGFRMLLQFLREKKRYFSTQDMAGEVAVEGAAAATEVPDSNQQSHKLERKWTFWFDNQSRPKQGAAWGSSLRKVYTFDTVEEFWCLYDQIPKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDSMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKNATNEAAQMSLGRKWKEIIDVTDKISFSFHVSIRKSRQNLDTVSDHQLDPVAVLNFEENTKNVISTYLSLLLYFLLLLALFSDPRQSIQIFHALNAQNFTSIYLLEHTHLEVNQYTEIIVLYDSIITSHRADLWGGGLSHLVEYFDLFFTALPELQKNEALPVSKERAYEEEEEEEEEEQR 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6716511 6720487 + CmoCh08G010330.1 Cmo08g01033 387766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01033 374 ProSitePatterns Eukaryotic initiation factor 4E signature. 119 142 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cmo08g01033 374 SUPERFAMILY eIF4e-like 55 223 IPR023398 -
Cmo08g01033 374 PANTHER BNAA08G29940D PROTEIN 48 231 - -
Cmo08g01033 374 Pfam Eukaryotic initiation factor 4E 65 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo08g01033 374 MobiDBLite consensus disorder prediction 355 374 - -
Cmo08g01033 374 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 48 231 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo08g01033 374 Gene3D RNA Cap, Translation Initiation Factor Eif4e 54 236 IPR023398 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01033 Cmo17g00144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01033 Cmo-Chr8:6716511 Cmo18g00422 Cmo-Chr18:2777211 2.83E-69 dispersed
Cmo17g00144 Cmo-Chr17:812362 Cmo08g01033 Cmo-Chr8:6716511 6.03E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01033 K03259 - csv:101208495 353.214