Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01071 ATGGTTGCAGAGCCTTGGATTGTGAAAATGGGGAACCAGGTTAGCGCTAATCTCAAGCAAGCCCTTCTCGAACCTTCAAAGAATAAGAGCAATACTAAGCAAACAATCGGTATTCTCTCTTTTGAAGTTGCTAATGTAATGTCCAAAACGATTTACCTTCATAAATCCCTGTCTGATTCGGCCATTTCAAAGCTCAAGAACGACATCTTGAGCTCTGATGGAGTTAGAAACCTCGTGTCCTTTGATGAGGTTCATCTTCTCGAGCTTGTGGTTGCAGAGAAGCTCGAGGATTTGAACCGTGTGGCTCATGTGGTTTCTAGGCTTGGGAAGAAGTGTTCTCAACCTGCGTTACAGGGTTTTGAACATGTGTATTTGGATATCATTAATGGAGTTATAAATGTGAAGGAATTGGGGTTTTTGGTTAAGGATATGGAAGGGATGATGAAGAAAATGGAGAGGTTTGTGAATGCTACGGCCAATTTGTACACTGAAATGGAGGTTTTGAATGAATTGGAACAGGCTGCTAAGAAGTTTCAGAATAATCAACATGAAGAGAGTAGAAAAGCTTATGAACAGAAGCTTATATGGCAGAAACAAGACGTGGGGCATCTCAAAGAGATTTCTCTTTGGAACCAAACCTTTGATAAGGTTGTTGAATTGCTAGCTAGAACTGTTTGTACTGTTTATGCAAGGATTCATTTGGTATTTGGAGACTCTTTTCTCAAGAAGGATGTTGAGATTGGTTCAGAGTCATTGGAATCGAAGCGTGTGTCACACCCCGGACCGAGACGTGGGTCGAGTTTCAAGTCTCAAATTAGCACAAGACGAGGCGAGGTTCCGTTGTTTACACCTGATGACTTCAATTTCCCTTGCGGAACCAATCCCAGGAGGCTTTTGATGGATTGTCTCAGTTTGAGTAGTTCAGTTTCCAAGATGGATGAGGAGGAGGACGACGAGAACGGTTATGATGATCGGAGCTGCCGAATCTCCGGTTGTAGCATTAGGAATAGTGGGTCGAGTCATTTCGGTTCGTTCAGTCAGGTGCAGTTCTCTGTTCCATTTGGGGTAGAGCAAAGACGAGCCAAAAGTGTGATGTCTAACAATGGAGGAAGTTTTGGATTCAAGAGTAGGTTATCTGTGTATGCACCGGTTTCGACCGTCGGTGGCTCGGCTCTTGCTTTGCATTATGCAAATATCATCATTGTCATAGAAAAGTTGCTTCGTTATCCTCATTTAGTCGGAGACGAAGCTCGGGACGATTTGTATCAAATGCTACCAACGAGTTTAAGAACATCCCTGAATAAACATCTGAAGTCCTATGTTAAGAGCCTAGCCATATATGATGCTCCTCTTGCGCACGATTGGAAGGAGACACTCGACGGGATCTTGAGCTGGCTTGCTCCATTGGCACACAACATGATTCGATGGCAAAGCGAGCGCAATTTCGAACAACATCAGATTGTGACACGGACTAACATTTTGCTTATCCAAACTATATACTTTGCTGATTGCAAGAAAACCGAGGACGCCATATGTGAGCTTCTTGTTGGATTGAATTACATTTGTCGTTACGAGCATCAGCAAAATGCATTGCTGGATTGCGCGAGTAGTTTCGACTTCGAAGATTGTATGGAGTGGCAGTTGCAATGTAAAGCTTCATATCTTAGTTGA 1671 43.15 MVAEPWIVKMGNQVSANLKQALLEPSKNKSNTKQTIGILSFEVANVMSKTIYLHKSLSDSAISKLKNDILSSDGVRNLVSFDEVHLLELVVAEKLEDLNRVAHVVSRLGKKCSQPALQGFEHVYLDIINGVINVKELGFLVKDMEGMMKKMERFVNATANLYTEMEVLNELEQAAKKFQNNQHEESRKAYEQKLIWQKQDVGHLKEISLWNQTFDKVVELLARTVCTVYARIHLVFGDSFLKKDVEIGSESLESKRVSHPGPRRGSSFKSQISTRRGEVPLFTPDDFNFPCGTNPRRLLMDCLSLSSSVSKMDEEEDDENGYDDRSCRISGCSIRNSGSSHFGSFSQVQFSVPFGVEQRRAKSVMSNNGGSFGFKSRLSVYAPVSTVGGSALALHYANIIIVIEKLLRYPHLVGDEARDDLYQMLPTSLRTSLNKHLKSYVKSLAIYDAPLAHDWKETLDGILSWLAPLAHNMIRWQSERNFEQHQIVTRTNILLIQTIYFADCKKTEDAICELLVGLNYICRYEHQQNALLDCASSFDFEDCMEWQLQCKASYLS 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6906698 6908368 + CmoCh08G010710.1 Cmo08g01071 387804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01071 556 PANTHER PLANT/PROTEIN (DUF668) 1 550 - -
Cmo08g01071 556 Pfam Domain of unknown function (DUF3475) 38 94 IPR021864 GO:0045927
Cmo08g01071 556 Pfam Protein of unknown function (DUF668) 386 475 IPR007700 GO:0045927
Cmo08g01071 556 PANTHER BNAC09G50660D PROTEIN 1 550 - -
Cmo08g01071 556 Coils Coil 168 188 - -
Cmo08g01071 556 MobiDBLite consensus disorder prediction 251 270 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01071 Cmo17g00172 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00433 Cmo-Chr6:2083931 Cmo08g01071 Cmo-Chr8:6906698 9.60E-73 dispersed
Cmo08g01071 Cmo-Chr8:6906698 Cmo15g00494 Cmo-Chr15:2254168 1.95E-42 dispersed
Cmo17g00172 Cmo-Chr17:1007279 Cmo08g01071 Cmo-Chr8:6906698 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01071 - - csv:101220789 978.008