Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01086 ATGGCTCGGGACGGGCATGTGGTGCCGGTGGATCCACAGACGGCGTTGACTGTTAAGAAGAAGAAACAGTCTTCTCGGAGTTGGATTCTGCTGGATTGTTCGGGCCAAGGGACCGTCCTCGATGTCGACAAGTATGCGATTATGCATCGAGTTCAAATTCATGCTCGAGATCTTCGGATTCTTGACCCTTTGCTTTCTTATCCCTCTAAGATTTTGGGGCGTGAGAGGGCCATCGTTCTTAATCTGGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCAACAGATGAACATGTCATCCCTGTGGTCGAAGAGCTTCAGAGACGACTGCCTCCTTCTAATGTCTTCCAAGAGTATCAGGGTGGGCTACATGATGGTGAAGCTGAAGAAGATGAATCCCCATTTGAATTCCGTGCCCTCGAGGTAGCTTTGGAAGCTATATGTAGTTTTCTTGCCGCTCGGACAACTGAACTGGAGACTGCTGCTTATCCAGCACTGGATGAGCTTACTACCAAGATTAGTAGCCGCAATTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACTAGGTTGACCGCAAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTAGACGATGACGATGATATGGCAGACCTTTACTTGTCAAGAAAGACGAGTTCATCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCATCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTATAGCAACTGCACGAGGGGACGAAGATGACATCGAGGAGCTTGAAATGTTACTGGAGGCCTACTTTATGCAGATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATATATTGACGACACAGAAGATTATATCAATATCCAGCTCGATAATCATCGAAATCAACTCATCCAGTTGGAGCTGTTTTTAAGTTCTGGAACGGTTTGTATGTCTATCTATTCATTGGTGAGTGCCATATTTGGAATGAATATTCCATATACTTGGAATGACGACCATGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGCGCTTTGCTGTTCGTAGTGATTGTTTACTATGCTCGCCTCAAAGGTTTGGTGGGGTCTTGA 1158 44.73 MARDGHVVPVDPQTALTVKKKKQSSRSWILLDCSGQGTVLDVDKYAIMHRVQIHARDLRILDPLLSYPSKILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNVFQEYQGGLHDGEAEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTTKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKTSSSSPVSGSGPANWFPASPTIGSKISRASRASIATARGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCMSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACALLFVVIVYYARLKGLVGS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6985242 6990229 - CmoCh08G010860.1 Cmo08g01086 387819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01086 385 Gene3D - 14 99 - -
Cmo08g01086 385 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 385 - -
Cmo08g01086 385 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 321 374 IPR045863 -
Cmo08g01086 385 Pfam CorA-like Mg2+ transporter protein 259 373 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo08g01086 385 Coils Coil 186 213 - -
Cmo08g01086 385 Gene3D Magnesium transport protein CorA, transmembrane region 103 315 - -
Cmo08g01086 385 CDD Mrs2_Mfm1p-like 28 382 IPR039204 -
Cmo08g01086 385 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 385 IPR039204 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01086 Cmo17g00183 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01086 Cmo-Chr8:6985242 Cmo19g00057 Cmo-Chr19:317618 1.75E-154 dispersed
Cmo17g00183 Cmo-Chr17:1083418 Cmo08g01086 Cmo-Chr8:6985242 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01086 K16075 - csv:101203841 652.899