Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g01091 | ATGGAGTCCGGTGGTCCGCCCACCCCTCCGCCGCTCCCGCCGCTGCCCACCGGCGCCATCCTTCTCGGCAAATATCAGTTAGGTCGTTTTCTCGGCCGTGGAAGCTTCGCTAAGGTGTACCAGGCTCGTTCCCTCGCCGATGACTCCATCGTCGCCATTAAAATCATCGACAAGAACAAAACCATCGATGCCGCCATGGAGCCTTGCATTATCCGTGAGATCGCCGCGATGCGCCGCCTTCAGCACCATCCAAACATCCTCAAAATCCACGAAGTCATGGCGACAAAGACGAAGATCTATCTCGTCGTCGATTACGCCTCCGGTGGTGAACTCTTCGCGAAACTCCTCCGCCGTGGTAGGTTAACGGAATCCTCCGCCCGCCGCTACTTTCAACAACTCGTCTCTGCTCTGCATTTCTGTCACCAAAACGCCGTCGCTCATCGCGACATCAAACCCCAAAATCTCCTCCTCGACGAATACGGTAACCTAAAGGTCTCCGACTTCGGTCTCTCAGCGTTACCAGAACAAATCAAAGACGGAATGCTCCACACAGCGTGCGGAACCCCTGCTTACGCAGCGCCAGAGGTAGTCACCAGGAGAGGCTACGACGGCGCAAAAGCCGACGCGTGGTCATGCGGCGTTATCCTCTTCGTCTTACTCTCCGGACACCTCCCATTCACCGACAACAATCTCGTCGCCATGTACAGTAAAGTTTACCGCCGGGAGTATCAATTTCCCGATTCGATTTCTAAGCCGGCTCGGCATTTGATTTTCCAACTTCTGGATCCAAATCCGAACACGAGGATGAGCATCGAGGCGTTGATGCAGCATTCGTGGTACAAGAAATCGGTGCGATCGAAGCCCCAAATCAGCAACAGAAGCTTGTTCGAATCGTTGGGTAATTACAAATCTGAATTGGGGGTTTCTGGATTAAATGCTTTTGATATAATTTCAATGTCATCTGGTTTGGATCTGTCGGGGCTGTTTGAGACAACGGATGATTGTAAGAAGAAGAGATTCACGACGGCGGTGAGCGTGGAAAAGGTGGAGGAGAGAGTAACAGAGATCGGTGGGGAATTGGGGTACAGAGTGGAGAAAGGGAAGAGCGGAGCAATTGGGTTAGGGAAAGGGAGGATGATTTTGGTGGTGGAGGTTTTGGAAATCACCGCTAATCTCTTAATTGTTGAAGTCAAGGTAGCTGAATCCAAAGCTGAGTTTGAGAGGATGCATTGGGGGGATTTGAAAGCCAAGTTGCAGGACATTGTTGTTTCTTGGCATACCAATGAGGAGGCCATATGA | 1299 | 51.66 | MESGGPPTPPPLPPLPTGAILLGKYQLGRFLGRGSFAKVYQARSLADDSIVAIKIIDKNKTIDAAMEPCIIREIAAMRRLQHHPNILKIHEVMATKTKIYLVVDYASGGELFAKLLRRGRLTESSARRYFQQLVSALHFCHQNAVAHRDIKPQNLLLDEYGNLKVSDFGLSALPEQIKDGMLHTACGTPAYAAPEVVTRRGYDGAKADAWSCGVILFVLLSGHLPFTDNNLVAMYSKVYRREYQFPDSISKPARHLIFQLLDPNPNTRMSIEALMQHSWYKKSVRSKPQISNRSLFESLGNYKSELGVSGLNAFDIISMSSGLDLSGLFETTDDCKKKRFTTAVSVEKVEERVTEIGGELGYRVEKGKSGAIGLGKGRMILVVEVLEITANLLIVEVKVAESKAEFERMHWGDLKAKLQDIVVSWHTNEEAI | 432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7004141 | 7005439 | - | CmoCh08G010910.1 | Cmo08g01091 | 387824 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g01091 | 432 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo08g01091 | 432 | SMART | serkin_6 | 25 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo08g01091 | 432 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 54 | IPR017441 | GO:0005524 | |
Cmo08g01091 | 432 | Pfam | NAF domain | 311 | 366 | IPR004041 | GO:0007165 | |
Cmo08g01091 | 432 | Pfam | Protein kinase domain | 25 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo08g01091 | 432 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 288 | IPR011009 | - | |
Cmo08g01091 | 432 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 16 | 428 | - | - | |
Cmo08g01091 | 432 | CDD | CIPK_C | 312 | 415 | - | - | |
Cmo08g01091 | 432 | PANTHER | SERINE/THREONINE KINASE | 16 | 428 | - | - | |
Cmo08g01091 | 432 | Gene3D | Transferase(Phosphotransferase) domain 1 | 18 | 309 | - | - | |
Cmo08g01091 | 432 | Gene3D | Kinase associated domain 1, KA1 | 310 | 424 | - | - | |
Cmo08g01091 | 432 | ProSiteProfiles | NAF domain profile. | 306 | 330 | IPR018451 | GO:0007165 | |
Cmo08g01091 | 432 | ProSiteProfiles | Protein kinase domain profile. | 25 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g01091 | Cmo14g01806 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01091 | Cmo-Chr8:7004141 | Cmo03g00316 | Cmo-Chr3:4336478 | 4.28E-133 | dispersed | |
Cmo14g01806 | Cmo-Chr14:13824099 | Cmo08g01091 | Cmo-Chr8:7004141 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74543 | PF00069 | Pkinase | 6.00E-71 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g01091 | K12761 | - | csv:101215156 | 781.556 |