Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01091 ATGGAGTCCGGTGGTCCGCCCACCCCTCCGCCGCTCCCGCCGCTGCCCACCGGCGCCATCCTTCTCGGCAAATATCAGTTAGGTCGTTTTCTCGGCCGTGGAAGCTTCGCTAAGGTGTACCAGGCTCGTTCCCTCGCCGATGACTCCATCGTCGCCATTAAAATCATCGACAAGAACAAAACCATCGATGCCGCCATGGAGCCTTGCATTATCCGTGAGATCGCCGCGATGCGCCGCCTTCAGCACCATCCAAACATCCTCAAAATCCACGAAGTCATGGCGACAAAGACGAAGATCTATCTCGTCGTCGATTACGCCTCCGGTGGTGAACTCTTCGCGAAACTCCTCCGCCGTGGTAGGTTAACGGAATCCTCCGCCCGCCGCTACTTTCAACAACTCGTCTCTGCTCTGCATTTCTGTCACCAAAACGCCGTCGCTCATCGCGACATCAAACCCCAAAATCTCCTCCTCGACGAATACGGTAACCTAAAGGTCTCCGACTTCGGTCTCTCAGCGTTACCAGAACAAATCAAAGACGGAATGCTCCACACAGCGTGCGGAACCCCTGCTTACGCAGCGCCAGAGGTAGTCACCAGGAGAGGCTACGACGGCGCAAAAGCCGACGCGTGGTCATGCGGCGTTATCCTCTTCGTCTTACTCTCCGGACACCTCCCATTCACCGACAACAATCTCGTCGCCATGTACAGTAAAGTTTACCGCCGGGAGTATCAATTTCCCGATTCGATTTCTAAGCCGGCTCGGCATTTGATTTTCCAACTTCTGGATCCAAATCCGAACACGAGGATGAGCATCGAGGCGTTGATGCAGCATTCGTGGTACAAGAAATCGGTGCGATCGAAGCCCCAAATCAGCAACAGAAGCTTGTTCGAATCGTTGGGTAATTACAAATCTGAATTGGGGGTTTCTGGATTAAATGCTTTTGATATAATTTCAATGTCATCTGGTTTGGATCTGTCGGGGCTGTTTGAGACAACGGATGATTGTAAGAAGAAGAGATTCACGACGGCGGTGAGCGTGGAAAAGGTGGAGGAGAGAGTAACAGAGATCGGTGGGGAATTGGGGTACAGAGTGGAGAAAGGGAAGAGCGGAGCAATTGGGTTAGGGAAAGGGAGGATGATTTTGGTGGTGGAGGTTTTGGAAATCACCGCTAATCTCTTAATTGTTGAAGTCAAGGTAGCTGAATCCAAAGCTGAGTTTGAGAGGATGCATTGGGGGGATTTGAAAGCCAAGTTGCAGGACATTGTTGTTTCTTGGCATACCAATGAGGAGGCCATATGA 1299 51.66 MESGGPPTPPPLPPLPTGAILLGKYQLGRFLGRGSFAKVYQARSLADDSIVAIKIIDKNKTIDAAMEPCIIREIAAMRRLQHHPNILKIHEVMATKTKIYLVVDYASGGELFAKLLRRGRLTESSARRYFQQLVSALHFCHQNAVAHRDIKPQNLLLDEYGNLKVSDFGLSALPEQIKDGMLHTACGTPAYAAPEVVTRRGYDGAKADAWSCGVILFVLLSGHLPFTDNNLVAMYSKVYRREYQFPDSISKPARHLIFQLLDPNPNTRMSIEALMQHSWYKKSVRSKPQISNRSLFESLGNYKSELGVSGLNAFDIISMSSGLDLSGLFETTDDCKKKRFTTAVSVEKVEERVTEIGGELGYRVEKGKSGAIGLGKGRMILVVEVLEITANLLIVEVKVAESKAEFERMHWGDLKAKLQDIVVSWHTNEEAI 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7004141 7005439 - CmoCh08G010910.1 Cmo08g01091 387824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01091 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Cmo08g01091 432 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g01091 432 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Cmo08g01091 432 Pfam NAF domain 311 366 IPR004041 GO:0007165
Cmo08g01091 432 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g01091 432 SUPERFAMILY Protein kinase-like (PK-like) 21 288 IPR011009 -
Cmo08g01091 432 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 428 - -
Cmo08g01091 432 CDD CIPK_C 312 415 - -
Cmo08g01091 432 PANTHER SERINE/THREONINE KINASE 16 428 - -
Cmo08g01091 432 Gene3D Transferase(Phosphotransferase) domain 1 18 309 - -
Cmo08g01091 432 Gene3D Kinase associated domain 1, KA1 310 424 - -
Cmo08g01091 432 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Cmo08g01091 432 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01091 Cmo14g01806 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01091 Cmo-Chr8:7004141 Cmo03g00316 Cmo-Chr3:4336478 4.28E-133 dispersed
Cmo14g01806 Cmo-Chr14:13824099 Cmo08g01091 Cmo-Chr8:7004141 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74543 PF00069 Pkinase 6.00E-71 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01091 K12761 - csv:101215156 781.556