Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01098 ATGAGTGCCGGCGCGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGCTGACGGAGGATGACATTTCGCAGCTCACGCGAGAGGACTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCGTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTGTTTGAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCAGTGCTCTCAGGAAGGTCGCCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGGTTCACCCAGGGAACCGAGTGATGATGCTCAGGTTACGATATCAGTTGATGAATCTGCGTATAGCAATATGGAGACTGCAAAATCTACTCCTGAGGATCCACTGGCTGAACCAGACAACAAGGTCACTAGTCCCAGAGATCAATGTGATACACATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCAGCAGATAAGGCATGGGCAATCATGCATCTAGCAGCTAGTCCAGTTCATTTCCCTCAGAATCACACCATGGGTGGAACTGCTTCATGTCAGTCTCCACCATGTCTTTTGCAGAATGCCAATGAGAGAGATGACCTTTTTTCTCCTAGTGGTACTATCTATCGGAATGTGCATACAGAGAAGATGGTTGAGTACCCTCAGCAGCAGCAGCAGCATATAAAAGGAACCAGTACTCGAGATTCTGATATTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGGGAAGGTTAAAGAACAAGAAAAATACAGGATTGGCTTCTTCTAGCCTGGAGGGGTATATGAACCATCAAATGAGGACGCATATATCCAATAAGAATTTAGGTCAGATTGTGACAAGCTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGCTTCCCTGTCGACCTTAATGTCAAAGATATCCAGGAGTGCTGA 1014 46.75 MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGASALRKVAVSPRVNSNQGGSPREPSDDAQVTISVDESAYSNMETAKSTPEDPLAEPDNKVTSPRDQCDTHGVDGQMTIFYCGKVNVYDGVPADKAWAIMHLAASPVHFPQNHTMGGTASCQSPPCLLQNANERDDLFSPSGTIYRNVHTEKMVEYPQQQQQHIKGTSTRDSDIEGQASRKVSLQRYLEKRKDRGRLKNKKNTGLASSSLEGYMNHQMRTHISNKNLGQIVTSSLSPTGVAKAFVGTADNQPKLACFPVDLNVKDIQEC 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7044552 7048643 - CmoCh08G010980.1 Cmo08g01098 387831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01098 337 MobiDBLite consensus disorder prediction 110 137 - -
Cmo08g01098 337 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Cmo08g01098 337 Pfam Jas motif 245 262 IPR018467 -
Cmo08g01098 337 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 4 306 - -
Cmo08g01098 337 MobiDBLite consensus disorder prediction 79 98 - -
Cmo08g01098 337 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 4 306 IPR040390 -
Cmo08g01098 337 MobiDBLite consensus disorder prediction 225 249 - -
Cmo08g01098 337 SMART tify_2 138 173 IPR010399 -
Cmo08g01098 337 MobiDBLite consensus disorder prediction 119 135 - -
Cmo08g01098 337 Pfam tify domain 144 172 IPR010399 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01098 Cmo17g00201 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01098 Cmo-Chr8:7044552 Cmo17g00654 Cmo-Chr17:6775962 9.29E-08 dispersed
Cmo17g00201 Cmo-Chr17:1185419 Cmo08g01098 Cmo-Chr8:7044552 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10295 PF06200 tify 4.80E-15 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01098 - - bhj:120092625 617.076