Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01128 ATGGGGTATAACATATATCGTATGATAGTGATACTATCGGCAATCTTCCAGAGATTCTTGGAAATATTCTACCTGAGTTGCTGCTTTTTAGTTGTACTGTTACACATTGCCATCCTCTTTAGGAGTGGACCCAGATGGCTGAGGAGCTCACTCTGGCTTCAATTTAAGCCTCATCAGATAGCTGCTGGAGCTGCATATCTGTCTGCCAAGCTATTGAATATGGATTTTGCTCCTTATCAAAATATCTTGCAAGAGTTCCAAGCTACGCCAGCTATTCTCCAAGATTCCAACCCCCACCTAACTTTGAGTTTCCTGGGTTTGATCGTCGTCAAAACTTGGGTTCATTTCAGCTGCTCTGGAATCGGAGCAGAACTGATCGACCATGTCTCCAATCAAATCCAAAATGGGATGAACAGAGCAAAGAACATATGGTCCCGCCTTCCCAACTCCGATGAACATGAGGACGACCATGTTAGTTTCTGGAAGAAGAATGATGGGTGTGGCGTCGAGAGCCTTGATTATGAGGTTATCGAGAATTATGCTTACTGGGATGACCAGGCGCAAAGAGGGAAATTGTTTGTTGGCTATAGTGTGGCGGTTAAGTGGCTGTATGCGTTGCTCATTGGCATTGGCAAGGAAGGGCCTCTTGTTCATACTGGCGCTTGTATTGCTTCTTTGTTAGGACAATTTCGAGTACGTAGAGCCCTTACGGCTCAACTGAAGGGTATTCCATTACTGGAATCAATACCAAAGTACCAGATGCGGAAAATTACAGCAAAAGAGGCTTGTGGAAAAAGGGTTGTCTCCTTCCCCCGTGTCGTTAAGGTTGCTGACGTTGTTAGTATTTTATGGAGCAACCGACATAATGGCTTTCCATCTAAAGTAGATTTTCAGCATAGTTCTTTGCCTTCAGATCCAAAAGGATCCATACAAAGCAGGCACAATTTCAGTGAATTTGTGAAGCCTGCTTCCAGTAAAGGCATTTCCATTGATGATATTCATCTTAGTTCAGAAGACTCGGAAATGTATATCGATCTGCTTCCTTACCTGAACCCATCTCCATATATTGTCCCAGAAGATATGTCTTTGACAAAGGATAGCGAAGATTCGGATGCGACGGAGCTACAATCGACGAGTGTAAGGTCTTTGACTCTCTATGATGCTTTACTTGTCTACCAAAACAGGAATACTTTGGTCATTGAGAAATCTGTGACATGGCTATCCCAAAAGAGCTCATCGTCCAGATAG 1248 43.51 MGYNIYRMIVILSAIFQRFLEIFYLSCCFLVVLLHIAILFRSGPRWLRSSLWLQFKPHQIAAGAAYLSAKLLNMDFAPYQNILQEFQATPAILQDSNPHLTLSFLGLIVVKTWVHFSCSGIGAELIDHVSNQIQNGMNRAKNIWSRLPNSDEHEDDHVSFWKKNDGCGVESLDYEVIENYAYWDDQAQRGKLFVGYSVAVKWLYALLIGIGKEGPLVHTGACIASLLGQFRVRRALTAQLKGIPLLESIPKYQMRKITAKEACGKRVVSFPRVVKVADVVSILWSNRHNGFPSKVDFQHSSLPSDPKGSIQSRHNFSEFVKPASSKGISIDDIHLSSEDSEMYIDLLPYLNPSPYIVPEDMSLTKDSEDSDATELQSTSVRSLTLYDALLVYQNRNTLVIEKSVTWLSQKSSSSR 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7198056 7208024 - CmoCh08G011280.1 Cmo08g01128 387861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01128 415 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 131 211 - -
Cmo08g01128 415 SUPERFAMILY Cyclin-like 46 143 IPR036915 -
Cmo08g01128 415 Gene3D - 44 149 - -
Cmo08g01128 415 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 237 366 - -
Cmo08g01128 415 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 131 211 - -
Cmo08g01128 415 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 237 366 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01128 Cmo17g00235 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01128 Cmo-Chr8:7198056 Cmo17g00236 Cmo-Chr17:1397520 5.34E-22 dispersed
Cmo17g00235 Cmo-Chr17:1386457 Cmo08g01128 Cmo-Chr8:7198056 6.77E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01128 K05016 - csv:101215989 230.335