Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g01140 | ATGGAAATGGATCAAGCTGATTTGAGTGTTCGATTATCTGCGCTTTGGAATATCATTGGTGCAAGAAGAAGCCTAAAAGACGACGGAATTCCTTGCCAAATTGAAGAGGGTGTGTTCTTAGGTTCTATTGGAGCTGCCCATAACAAGGATGAACTGAAGAAATTGAATATCACTCACATTTTAACCATTGCTTGTTCCATGCCACCTGCTAATCCAAATGATTTCGTATATAAAGTAGTTGGAGTCGTGGACACTAGAGATGCCGATATTAAGCAGCACTTCGATGATTGTTTCAACTTTATTGAGGAAGGAAGACAATCTGGAGGGGTCTTGATTCATTGCTTTGCTGGAGTATCCAGAAGTGTAACCATTACACTTGCCTATCTGATGAAAAAACGTGGTATGAATCTAACTGAAGCATTGGAACATGTCAAGAGTAGACGACCACAGGCTTCTCCGAACGTCGGTTTCATGGTTCAACTCAAGGAATTCGAAACAACTCTTCAAGCTAGCAAAGAGGATGGGATGAAATTGTCAAATGTTTGA | 546 | 40.66 | MEMDQADLSVRLSALWNIIGARRSLKDDGIPCQIEEGVFLGSIGAAHNKDELKKLNITHILTIACSMPPANPNDFVYKVVGVVDTRDADIKQHFDDCFNFIEEGRQSGGVLIHCFAGVSRSVTITLAYLMKKRGMNLTEALEHVKSRRPQASPNVGFMVQLKEFETTLQASKEDGMKLSNV | 181 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7275567 | 7279193 | + | CmoCh08G011400.1 | Cmo08g01140 | 387873 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g01140 | 181 | SMART | dsp_5 | 30 | 167 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo08g01140 | 181 | Pfam | Dual specificity phosphatase, catalytic domain | 38 | 166 | IPR000340 | GO:0008138|GO:0016311 | |
Cmo08g01140 | 181 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 27 | 170 | IPR029021 | - | |
Cmo08g01140 | 181 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 30 | 170 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo08g01140 | 181 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE 1B | 19 | 172 | - | - | |
Cmo08g01140 | 181 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE | 19 | 172 | - | - | |
Cmo08g01140 | 181 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 92 | 149 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo08g01140 | 181 | CDD | DSP | 31 | 163 | - | - | |
Cmo08g01140 | 181 | Gene3D | Protein tyrosine phosphatase superfamily | 25 | 178 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01870 | Cmo-Chr4:9385055 | Cmo08g01140 | Cmo-Chr8:7275567 | 1.90E-22 | dispersed | |
Cmo06g00943 | Cmo-Chr6:7252324 | Cmo08g01140 | Cmo-Chr8:7275567 | 2.09E-20 | dispersed | |
Cmo08g01140 | Cmo-Chr8:7275567 | Cmo10g00017 | Cmo-Chr10:117082 | 2.23E-20 | dispersed | |
Cmo11g02021 | Cmo-Chr11:13784088 | Cmo08g01140 | Cmo-Chr8:7275567 | 1.49E-07 | dispersed | |
Cmo16g01171 | Cmo-Chr16:8345053 | Cmo08g01140 | Cmo-Chr8:7275567 | 1.54E-07 | dispersed | |
Cmo08g01140 | Cmo-Chr8:7275567 | Cmo18g00757 | Cmo-Chr18:9203880 | 2.33E-24 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g01140 | - | - | bhj:120092603 | 319.701 |