Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01148 ATGCAGCACGATCAGAGAAGAAAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACTGGGGAAAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATTGTAGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAGGGATATATATGTTGTGTTTGAGCTCATGGAATCTGATTTACACCAAGTTATCAAAGCAAACGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGTGGCTTGAAATATATACACACAGCAAACGTCTTCCACAGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCCAGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGGGCTCCTGAACTGTGCGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCAGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTTGTGCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCTAATGCAGAAGCCATTGCCAGGATACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCCCGAGCACTTCCCTTATTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAAAGAGAGCCATCTGCTCAACCTGTCACTAAGATGGAATTTGAATTTGAGAGACGAAGAATTACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAAATTCTCGAGTACCATCCAAAGATGTTGAAGGAGTTCTTAGATGGATCAGAACCTACCAGTTTCATGTATCCAAGTGCAGTTGACCACTTTAAGAAGCAATTTGCATACCTTGAAGAACACTATGGAAATGGTGCAACCGTTGCCCCTCCTGAAAGACAACATGCATCCTTGCCGAGGCAATGTGTTTTATATTCAGATAACATGGTACAGAACTCGGCACAAGTTGTGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTCAACTAGAGCTCCTATTCAAGTTCCTCAATCTATTCAAGGCAATGCTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACTGTGGGGCTACAGCAGCAGCAGTGGTACCAGAAGTTCTTGAACAGCGGAGGACGACCAGAAACCCTTCCATTCCACCACAGTACGCCCCTAATAACTGTTCATATCCTAGAAGAAACTCATCATGTAAAAATGATACGACTGAAGATGAAGCCATTGAAGGTTCGAATGGATTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGCGGACCAGGAAATAACTGGTACTGA 1698 42.11 MQHDQRRKSSIDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARIRNEKARRYLSSMRKKKPVPFSQKFPHADPRALPLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTSFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRQCVLYSDNMVQNSAQVVNDLSKCSIKEVERPQVDRTCNIPSTRAPIQVPQSIQGNAARPGKVVGSVLRYNCGATAAAVVPEVLEQRRTTRNPSIPPQYAPNNCSYPRRNSSCKNDTTEDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWY 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7341665 7346912 + CmoCh08G011480.1 Cmo08g01148 387881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01148 565 MobiDBLite consensus disorder prediction 500 544 - -
Cmo08g01148 565 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g01148 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Cmo08g01148 565 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cmo08g01148 565 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cmo08g01148 565 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cmo08g01148 565 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g01148 565 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Cmo08g01148 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Cmo08g01148 565 MobiDBLite consensus disorder prediction 500 525 - -
Cmo08g01148 565 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo08g01148 565 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cmo08g01148 565 CDD STKc_TDY_MAPK 24 361 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01148 Cmo17g00265 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00040 Cmo-Chr2:218307 Cmo08g01148 Cmo-Chr8:7341665 0 dispersed
Cmo08g01148 Cmo-Chr8:7341665 Cmo11g00311 Cmo-Chr11:1499676 0 dispersed
Cmo20g00282 Cmo-Chr20:1368617 Cmo08g01148 Cmo-Chr8:7341665 0 dispersed
Cmo17g00265 Cmo-Chr17:1582906 Cmo08g01148 Cmo-Chr8:7341665 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74545 PF00069 Pkinase 7.70E-68 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01148 - K04371 csv:101216364 1089.72