Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g01148 | ATGCAGCACGATCAGAGAAGAAAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACTGGGGAAAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATTGTAGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAGGGATATATATGTTGTGTTTGAGCTCATGGAATCTGATTTACACCAAGTTATCAAAGCAAACGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGTGGCTTGAAATATATACACACAGCAAACGTCTTCCACAGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCCAGAGTTGCTTTTAATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGGGCTCCTGAACTGTGCGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCAGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTTGTGCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCTAATGCAGAAGCCATTGCCAGGATACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCCCGAGCACTTCCCTTATTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAAAGAGAGCCATCTGCTCAACCTGTCACTAAGATGGAATTTGAATTTGAGAGACGAAGAATTACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAAATTCTCGAGTACCATCCAAAGATGTTGAAGGAGTTCTTAGATGGATCAGAACCTACCAGTTTCATGTATCCAAGTGCAGTTGACCACTTTAAGAAGCAATTTGCATACCTTGAAGAACACTATGGAAATGGTGCAACCGTTGCCCCTCCTGAAAGACAACATGCATCCTTGCCGAGGCAATGTGTTTTATATTCAGATAACATGGTACAGAACTCGGCACAAGTTGTGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTCAACTAGAGCTCCTATTCAAGTTCCTCAATCTATTCAAGGCAATGCTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGATACAACTGTGGGGCTACAGCAGCAGCAGTGGTACCAGAAGTTCTTGAACAGCGGAGGACGACCAGAAACCCTTCCATTCCACCACAGTACGCCCCTAATAACTGTTCATATCCTAGAAGAAACTCATCATGTAAAAATGATACGACTGAAGATGAAGCCATTGAAGGTTCGAATGGATTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGCGGACCAGGAAATAACTGGTACTGA | 1698 | 42.11 | MQHDQRRKSSIDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARIRNEKARRYLSSMRKKKPVPFSQKFPHADPRALPLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTSFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRQCVLYSDNMVQNSAQVVNDLSKCSIKEVERPQVDRTCNIPSTRAPIQVPQSIQGNAARPGKVVGSVLRYNCGATAAAVVPEVLEQRRTTRNPSIPPQYAPNNCSYPRRNSSCKNDTTEDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWY | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7341665 | 7346912 | + | CmoCh08G011480.1 | Cmo08g01148 | 387881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g01148 | 565 | MobiDBLite | consensus disorder prediction | 500 | 544 | - | - | |
Cmo08g01148 | 565 | SMART | serkin_6 | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo08g01148 | 565 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 9 | 479 | - | - | |
Cmo08g01148 | 565 | ProSitePatterns | MAP kinase signature. | 60 | 163 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cmo08g01148 | 565 | Gene3D | Transferase(Phosphotransferase) domain 1 | 111 | 339 | - | - | |
Cmo08g01148 | 565 | Gene3D | Phosphorylase Kinase; domain 1 | 40 | 361 | - | - | |
Cmo08g01148 | 565 | Pfam | Protein kinase domain | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo08g01148 | 565 | ProSitePatterns | Protein kinases ATP-binding region signature. | 31 | 55 | IPR017441 | GO:0005524 | |
Cmo08g01148 | 565 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 9 | 479 | - | - | |
Cmo08g01148 | 565 | MobiDBLite | consensus disorder prediction | 500 | 525 | - | - | |
Cmo08g01148 | 565 | ProSiteProfiles | Protein kinase domain profile. | 25 | 316 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo08g01148 | 565 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 320 | IPR011009 | - | |
Cmo08g01148 | 565 | CDD | STKc_TDY_MAPK | 24 | 361 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g01148 | Cmo17g00265 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00040 | Cmo-Chr2:218307 | Cmo08g01148 | Cmo-Chr8:7341665 | 0 | dispersed | |
Cmo08g01148 | Cmo-Chr8:7341665 | Cmo11g00311 | Cmo-Chr11:1499676 | 0 | dispersed | |
Cmo20g00282 | Cmo-Chr20:1368617 | Cmo08g01148 | Cmo-Chr8:7341665 | 0 | dispersed | |
Cmo17g00265 | Cmo-Chr17:1582906 | Cmo08g01148 | Cmo-Chr8:7341665 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74545 | PF00069 | Pkinase | 7.70E-68 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g01148 | - | K04371 | csv:101216364 | 1089.72 |