Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo08g01176 | ATGGCGTCTGAAATGATTGTCGAATCAGGCTCGTCGATAATAGATTTTGGGATGGAGTTAGTCGCGGATCATACTTCGGTGGTTTCTTTAAACTTATTTGTAGCTCTTCTTTGTGGTTGCATTGTTGTTGGTCATTTGTTAGAGGAAAACCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGGTTGTGTACCGGCATCATCATATTGCTAACAACTAGAGGGAAAAGTTCGCATTTATTTTTGTTCAATGAAGAGCTTTTCTTTATCTATCTCCTTCCGCCTATCATTTTCAATGCCGGTTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCCAGAAAATGAATATTGGTTCTCTTGATCTTGGAGATTATCTTGCTATTGGAGCTATTTTTTCTGCAACAGACTCTGTTTGTACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTCCTGTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACTTCTGTTGTGCTATTCAATGCAATCCAGAACTTTGATCTGTCTCACATGAATTCAAGCATCATTCTGCAATTCATTGGGAACTTTTTGTATCTGTTCATTGCAAGTACCGTGCTGGGAATTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGTGAAGTTGCTCTTATGATACTCATGGCGTACTTTTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCACTATACATGGCATAACGTAACTGAAAGTTCCAGAGTTACTACAAAGCATGCTTTCGCCACTCTTTCTTTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATCGAGAAGTGGAGATTTGTTAGCCACAGTCCGGGGAAATCAATTGGGGTGAGCTCAATACTGTTGGGACTGGTTCTGGTTGGAAGAGCAGCCTTCGTTTTTCCATTATCCTCCTTGTCCAATCTGACCAAGAAGTCCTCGCATGAAAAACTCAACTTGGAACAACAAGTCACTATTTGGTGGGCTGGTCTCATGCGTGGTGCCGTTTCAATGGCACTTGCATACAATCAGGTCAGGCCACACCCATTTACCAGGCAATGCAATCATGATCACCAGTACCATCACAGTTGTTCTTTCCAGCACAGTGGGATTCTGCTACCCCAACCAAAATACACAATGAGCATGCTGTCTTCGGAACCCTCATCCCCAAAATCCTTCACAGTCCCACTCCTCACCAATGACGACCCAAACAGCCATTCCCAATCCCAATCCCATTCCCATTCCCCTCTGGGGCTGTTCCTCAGAATCCCGGCCCATACGGTTCACCATTATTGGCGGAGATTCGACGACGCCTTCATGCGCCCTGTTTTTGGAGGGAGGGGCTTTGTGCCCTTCGTCCCTGGCTCCCCTACCGAAGACCCCAACCAACAATGGCAAACTGAAGGACCACTTGAAGCCGCCGTTGATGACAACAAAACCATTCTTATACAGACTCGATGGTAA | 1656 | 43.96 | MASEMIVESGSSIIDFGMELVADHTSVVSLNLFVALLCGCIVVGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIILQFIGNFLYLFIASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSSLSNLTKKSSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQVRPHPFTRQCNHDHQYHHSCSFQHSGILLPQPKYTMSMLSSEPSSPKSFTVPLLTNDDPNSHSQSQSHSHSPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTEDPNQQWQTEGPLEAAVDDNKTILIQTRW | 551 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7482903 | 7488855 | - | CmoCh08G011760.1 | Cmo08g01176 | 387909 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo08g01176 | 551 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 436 | 530 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo08g01176 | 551 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 17 | 409 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 | |
Cmo08g01176 | 551 | MobiDBLite | consensus disorder prediction | 446 | 477 | - | - | |
Cmo08g01176 | 551 | Gene3D | - | 150 | 201 | - | - | |
Cmo08g01176 | 551 | PANTHER | SODIUM/HYDROGEN EXCHANGER 3 | 436 | 530 | - | - | |
Cmo08g01176 | 551 | PANTHER | SODIUM/HYDROGEN EXCHANGER 3 | 17 | 409 | - | - | |
Cmo08g01176 | 551 | Pfam | Sodium/hydrogen exchanger family | 32 | 406 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cmo08g01176 | 551 | PRINTS | Na+/H+ exchanger signature | 117 | 125 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo08g01176 | 551 | PRINTS | Na+/H+ exchanger signature | 102 | 116 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo08g01176 | 551 | PRINTS | Na+/H+ exchanger signature | 157 | 167 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Cmo08g01176 | 551 | PRINTS | Na+/H+ exchanger signature | 88 | 99 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo08g01176 | Cmo-Chr8:7482903 | Cmo10g01169 | Cmo-Chr10:10438999 | 0 | dispersed | |
Cmo11g01307 | Cmo-Chr11:8965531 | Cmo08g01176 | Cmo-Chr8:7482903 | 0 | transposed | |
Cmo17g01105 | Cmo-Chr17:9077906 | Cmo08g01176 | Cmo-Chr8:7482903 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo08g01176 | - | - | cmos:111436756 | 963.755 |