Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01217 ATGGGATCGGAGCAGTTGATGGCCGGAGGTGGGCCTCGATATGTTCAAATGCAATCGGAGCAGCCTACAGCTTCGATGTCGTCGTTTTTCTCGTTTCATCATGACGCTCCTGAGCCAACGAGGATTTTCGATGAATTGCCGAAGGCCTCAATTATTTCCGTTTCTCGCCCGGATGCCGGTGATATCAGTCCGATGCTTCTTTCTTACACAATCGAATGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACGACAGTGATCCAAGATGAGGATGGACCAGATGATGAAGCCAATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCGTCCAGTGCTGCCCTGCCTATCATTCGGCCTGCCTTAGGAAGGCAGCATTCTATGTCTGATAGAGCTAAGACTGCAATGCAAGGGTACCTGAATCACTTCTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTTATGGTGAAGCATCTACCTAAAATTGCAAGGGAAGATGACGCTAGGAAATGCTGCCTATGCCGGTGTTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGTTTTTTGGCCTTGTTGGGAGATCCTTTTGACACTCAACCAATGGATATAATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTCTCTTTGGCAAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAGCATTAGGATAAGAGCAAAGAACGGATCCAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCGGGACTGAGGCCTCCTGAGGGATGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACAGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGGTCAAGCAGCTTTCGAAGCTATTGCCTTTTCCATTGAACGTGCAAAATCGGAGATTTTCATTTGCGGCTGGTGGCTTTGTCCAGAATTGTATCTGCGGCGTCCTTTTATTTCAAATGCTTCATCTAGGCTCGATGCTTTGCTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAGATTAACAGTGTTTATAGCAAGAGAAAACTTCTAGGCATCCATGAGAATGTGAGAGTATTACGCTACCCTGACCACTTCTCCAGTGGTGTGTCCCACCATGAAAAACTTGTCATTGTCGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGTGATCGTCCTCCTTCAGTATGGCCCGGGAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTGGATCGCGGTAAATATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACTTAGCTAGACATTTTGTCCAACGCTGGAATTATGCTAAGAGAAACAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATACCCGAGAATTGGAGGTTGAAAGGAAGAGTTTTGACAATTCTCAAGAATCAACAATACAGGATTCATTTTCTCGAGGATCATCTTTTCACGATATTCCTTTGCTTTTACCTCAAGAGGCTGATGGACAGGATTCTCAAAATGAAGGTCCAAAATCAAATGGACTGGAGCCCATTGCTAATCCCCTCGATCAGCCAAGTAAGATCAGCAGCGGTCTCTCGTTCTCTTTTAGGAAGATCAAAGTTGAACCCTTGGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTCGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACACATCATCGTGTCAAAAGCTCAGAGTTGGAGTGGTGGGAAACACAAGACAGGGGACATGGTGGCTTTGCAGATGAATCCGGACAAGTTGGTCCGTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAATGGTCTGCTGGGACGAGCCGAACTGAAGAGAGCATTCACATTGCATACTGCTCTCTTATAGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGGAATCGTGTGTTAGAAGCATTATACCGCCGCATAATGAGAGCTTACCGTGAAAAGAAAACTTTTAGGGTCATTATTGTAATTCCACTCTTGCCTGGATTTCAGGGAGGACTGGATGACAGTGGTGCAGCATCCGTTAGAGCAATAATGCATTGGCAGTATCGAACTATATGTCGAGGACAAAATTCAATATTCCATAATCTCTATGATCTTCTTGGTTCAAAAGTTCATGATTATATATCATTCTATGGCCTCAGATCTTATGGTAAACTCTTTGATGGTGGTCCTGTGGCTACCAGCCAGGTGTACGTGCATAGTAAAATTATGATCGTAGACGATTGTATTGCTTTGATTGGATCGGCTAACATCAACGACAGGAGCTTACTCGGTTCTAGGGATTCTGAGATTGCTATTGTGATCGAAGATAAGGAACTTATCAATTCATATATGGGAGGACAACCATGGAAAGCGGGAAAGTTTTGTTGGAGTCTCCGCCTCTCTCTTTGGTCTGAACATCTTGGTCTTCGTCCGGGACAGATCAATCAAATAGTTGACCCAGTTTCTGACTCAACCTACAAGGATACATGGATGGGAACTGCTAAGACGAACACGACAATATACCAAGATGTATTTTCCTGCCTACCCAACGACCTCATAAATTCCAGAGCTGGACTGAGGCAAAGTGTGGCTTTCTGGAAAGAGAGGTTGGGGCACACCACAATAGATTTAGGAATTGCACCGGAGAGGCTGGAGTTTTACAAGAATGGAGAAATTGAAAGGATTGATCCAATGGAGAGATTAAGTTCAGTGAAGGGACATCTTGTCTCCTTCCCATTGGAATTCCTGAGCAAGGAAGATTTAAGACCTGTGTTCAATGAGAGTGAGTACTATGCATCTCAAGTTTTTCATTAA 3261 43.54 MGSEQLMAGGGPRYVQMQSEQPTASMSSFFSFHHDAPEPTRIFDELPKASIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVKEWLQNLGIGEHTTVIQDEDGPDDEANPLHHDESSKNRDVPSSAALPIIRPALGRQHSMSDRAKTAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAREDDARKCCLCRCFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRSIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDGQAAFEAIAFSIERAKSEIFICGWWLCPELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDRPPSVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDLARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNTRELEVERKSFDNSQESTIQDSFSRGSSFHDIPLLLPQEADGQDSQNEGPKSNGLEPIANPLDQPSKISSGLSFSFRKIKVEPLGPDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVKSSELEWWETQDRGHGGFADESGQVGPCASCRCQVIRSVSQWSAGTSRTEESIHIAYCSLIEKAEHFVYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLYDLLGSKVHDYISFYGLRSYGKLFDGGPVATSQVYVHSKIMIVDDCIALIGSANINDRSLLGSRDSEIAIVIEDKELINSYMGGQPWKAGKFCWSLRLSLWSEHLGLRPGQINQIVDPVSDSTYKDTWMGTAKTNTTIYQDVFSCLPNDLINSRAGLRQSVAFWKERLGHTTIDLGIAPERLEFYKNGEIERIDPMERLSSVKGHLVSFPLEFLSKEDLRPVFNESEYYASQVFH 1086
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7720766 7730557 + CmoCh08G012170.1 Cmo08g01217 387950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01217 1086 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 883 910 IPR001736 GO:0003824
Cmo08g01217 1086 MobiDBLite consensus disorder prediction 104 130 - -
Cmo08g01217 1086 MobiDBLite consensus disorder prediction 621 648 - -
Cmo08g01217 1086 SMART PH_update 193 321 IPR001849 -
Cmo08g01217 1086 MobiDBLite consensus disorder prediction 105 127 - -
Cmo08g01217 1086 SMART pld_4 451 478 IPR001736 GO:0003824
Cmo08g01217 1086 SMART pld_4 883 910 IPR001736 GO:0003824
Cmo08g01217 1086 Gene3D - 219 317 IPR011993 -
Cmo08g01217 1086 SUPERFAMILY PH domain-like 226 317 - -
Cmo08g01217 1086 CDD PLDc_vPLD1_2_yPLD_like_2 743 927 - -
Cmo08g01217 1086 PANTHER PHOSPHOLIPASE 98 1083 - -
Cmo08g01217 1086 Pfam PLD-like domain 756 931 IPR025202 -
Cmo08g01217 1086 SUPERFAMILY Phospholipase D/nuclease 723 932 - -
Cmo08g01217 1086 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 451 478 IPR001736 GO:0003824
Cmo08g01217 1086 PANTHER PHOSPHOLIPASE 31 89 - -
Cmo08g01217 1086 PANTHER PHOSPHOLIPASE D 31 89 IPR015679 -
Cmo08g01217 1086 PANTHER PHOSPHOLIPASE D 98 1083 IPR015679 -
Cmo08g01217 1086 SUPERFAMILY Phospholipase D/nuclease 299 570 - -
Cmo08g01217 1086 Gene3D Endonuclease Chain A 707 940 - -
Cmo08g01217 1086 Pfam Phospholipase D Active site motif 454 478 IPR001736 GO:0003824
Cmo08g01217 1086 CDD PLDc_vPLD1_2_yPLD_like_1 347 488 - -
Cmo08g01217 1086 ProSiteProfiles PH domain profile. 228 319 IPR001849 -
Cmo08g01217 1086 CDD PH_PLD 170 317 - -
Cmo08g01217 1086 PIRSF PLD_euk 48 604 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cmo08g01217 1086 PIRSF PLD_euk 658 1086 IPR016555 GO:0004630|GO:0006654|GO:0048017
Cmo08g01217 1086 Gene3D Endonuclease Chain A 340 592 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01217 Cmo17g00333 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g01108 Cmo-Chr5:8832121 Cmo08g01217 Cmo-Chr8:7720766 0 dispersed
Cmo08g01217 Cmo-Chr8:7720766 Cmo03g00677 Cmo-Chr3:5991150 1.51E-17 dispersed
Cmo17g00333 Cmo-Chr17:2001738 Cmo08g01217 Cmo-Chr8:7720766 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01217 K01115 - csv:101211856 2075.83