Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo08g01242 ATGGCATTTTGGTGGACTGTGTTTGTTCTAGGATTTGCTTACGCCATCTGTAGGTTTCTCGTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTGTGGACGACGGGAATCAGGCGCCGGAGAATAGCTACATCTATATTCCACCTAGAGTAAAGACACAACAGCAAGACAAGAAGGTCCAATGTTACGAGCCTGCAAATATGAAATACTTGGGATTCTTTCCTGCATTGACACGAGACGAGGTCAAGGAGCGTGTTGCTTCAGCCAGAAAAGCACAAAACGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATAATTTTGAAGTATATAATTGAACACCAAAAGCTAATTTGCGAGATCTCCTCCCGTGACACTGGGAAAACGATAGTGGATGCTAGTATAGGAGAAGTTATGGCGATATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGGAGGGCAACACTTCACAAAAAAGCACGAGTGGAATTTCATCCCCTTGGAGTCATTGGGGCAATAGTTCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTCCTTGCAGCAGTCTTTGCAGGAAATGGCATTGTAGTTAAGATTTCAGAACATGCAAGTTGGTCCGGATGCTTCTACATCAGGATTATACAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTCGATGTGATAACAGGGTTTTCTGAAACAGGTGAAGCGCTAGTATCTTCAGTAGATAAAATGATATTCATTGGGTCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCCGAGACACTTATTCCAGTTACTCTTGAATTGGGTGGGAAGGACGCTTTTATTGTCTGTGAGGATGTAGATTTGGATCACGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTAATGGGGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAGAGCCTTGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTCGATCAATATTTCCCACCTACCGTTATCGTTGATGTCAACCATACCATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCAGCACAGATGATGAGGTCGTGAAGCTTGCAAATGATTCAAAATTTGGGCTTGGTTGTGGTGTGTTTTCTGGCAGTCAGCAGCGTGCCAGGACCATCGCTTTGCAGATACGTTGTGGAAGTGTTGCAATTAACGACTTCGCCACAAATTATTTTTGTCAGTCCTTGCCATTTGGTGGTGTGAAAGAGAGTGGATTCGGTCGATTTTCGGGCGTTGAAGGATTACGAGCTTGTTGTATCGTCAAAGCAGTGGTCGAGGACAGGTGGTGGCCTTACATTCAAACTAAGTATCCCAAGCCTCTTACGTATCCTGTTGCAGACAATGCTTTTGAGTTTCAGATGTCAGTTGTTGAAGCAACGTACGGCCTGAACATATGGGATCGGCTAAGAGCATTGATCAATGTTATGAAGATGCTGTCCCAGGAGAACACTTCGGGTAAACATAACTCTGTCATTGGCGATGGAGATAAGAAAGCTGATTGA 1812 44.04 MAFWWTVFVLGFAYAICRFLVMLIPPNVPSIEVDASDVVDDGNQAPENSYIYIPPRVKTQQQDKKVQCYEPANMKYLGFFPALTRDEVKERVASARKAQNEWAKSSFKQRRLLLRIILKYIIEHQKLICEISSRDTGKTIVDASIGEVMAICEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKISEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFSETGEALVSSVDKMIFIGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCNGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFSTDDEVVKLANDSKFGLGCGVFSGSQQRARTIALQIRCGSVAINDFATNYFCQSLPFGGVKESGFGRFSGVEGLRACCIVKAVVEDRWWPYIQTKYPKPLTYPVADNAFEFQMSVVEATYGLNIWDRLRALINVMKMLSQENTSGKHNSVIGDGDKKAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7855275 7860704 - CmoCh08G012420.1 Cmo08g01242 387975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo08g01242 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Cmo08g01242 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Cmo08g01242 603 SUPERFAMILY ALDH-like 56 532 IPR016161 GO:0016491
Cmo08g01242 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Cmo08g01242 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Cmo08g01242 603 CDD ALDH_F15-22 69 531 - -
Cmo08g01242 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Cmo08g01242 603 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01242 Cmo17g00356 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g01242 Cmo-Chr8:7855275 Cmo10g00644 Cmo-Chr10:2954680 5.77E-67 dispersed
Cmo17g00356 Cmo-Chr17:2168133 Cmo08g01242 Cmo-Chr8:7855275 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo08g01242 - - csv:101209796 1090.1