Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo08g01251 | ATGGCGTCATCTGTTCTTTCCAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTACGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAATCAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCCGGTTGCCGGAAAGAACCTTTGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA | 606 | 52.64 | MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPPS | 201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 7898614 | 7899219 | + | CmoCh08G012510.1 | Cmo08g01251 | 387984 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo08g01251 | 201 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 15 | 200 | - | - | |
| Cmo08g01251 | 201 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
| Cmo08g01251 | 201 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 15 | 200 | IPR044660 | GO:0006355 | |
| Cmo08g01251 | 201 | CDD | bHLH_AtIBH1_like | 128 | 183 | IPR044549 | GO:0006355 | |
| Cmo08g01251 | 201 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 142 | 189 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo08g01251 | Cmo-Chr8:7898614 | Cmo10g01242 | Cmo-Chr10:12527421 | 7.07E-47 | dispersed | |
| Cmo14g01615 | Cmo-Chr14:12822819 | Cmo08g01251 | Cmo-Chr8:7898614 | 5.90E-88 | wgd | |
| Cmo17g00365 | Cmo-Chr17:2240071 | Cmo08g01251 | Cmo-Chr8:7898614 | 6.34E-130 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo08g01251 | - | - | csv:101220618 | 313.923 |