Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00013 ATGGTAATGGCGCTATTTCAGCCACACACTTCACCTTCTGCAATTTCATCTTCCTCCGCCTCATTCTATGGGAGTTCTCTTCAACAACTCCGTTCGCGCACCATAGCCCTCAATCTTCGAAACAGCCCCTCCATCCCTCATCGTTTCACTTGCACAGCTTCATGGCAGGAGCTTGCGGGGGTTTTGATATTCTCCGCAATTCCTTTCACGGCCGTGAAAGCCATCGCCAATAGCCCATTCGGAGAGTCGCTCCAGAGGCAATTGGAAAAGAAGAAAAATGCTGCCGTCGCCAAGTCTTCGAAGTTCAAGGCTCTTGCTGAGCAGGCTAGAAAAGATAGCTCGTGGTATGGAGAAAAGCGTCCTCGCTGGCTTGGTCCACTACCATACAATTATCCAAAATATCTGACAGGTGAACTGCCGGGTGATTATGGATTTGATATTGCAGGTCTGAGTGAGGATCCAGTGGCTTTTCGGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCGTCCCTTGGTGCTTTAGTTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGATATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATTCCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCTGAGTATGCAAGATATTGTGGCATAGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGATCCCTTGAACCTGTCCAAGGATGCTGCAGCTTTTGAGGAACTGAAAGTGAAAGAGATTAAAAATGGGCGGTTAGCCATGGTTGCTTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTAAGGGACCAATCCAAAACCTTCTTGAACACGTTTCAGACCCTTTCCACAATAACTTTCTTTCCCTGCTCAACTCATCATGA 1014 46.45 MVMALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVLIFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPRWLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGKGPIQNLLEHVSDPFHNNFLSLLNSS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 80869 86905 - CmoCh09G000130.1 Cmo09g00013 388015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00013 337 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 51 330 IPR001344 GO:0009765|GO:0016020
Cmo09g00013 337 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 51 330 - -
Cmo09g00013 337 SUPERFAMILY Chlorophyll a-b binding protein 114 334 - -
Cmo09g00013 337 Pfam Chlorophyll A-B binding protein 132 307 IPR022796 -
Cmo09g00013 337 Gene3D Chlorophyll a/b binding protein domain 122 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00013 Cmo-Chr9:80869 Cmo07g00129 Cmo-Chr7:701442 5.72E-62 dispersed
Cmo09g00013 Cmo-Chr9:80869 Cmo16g00863 Cmo-Chr16:4590539 1.74E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00013 K14172 - csv:101209460 604.364