Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00017 ATGGCGACGGTGGCGATGAAGGGTAAAGTTTGTGTTACAGGGGCTGGAGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTGCTATCCAGGGATTATATTGTCCACGGAACTGTCAGGGAACCCGGTAATCACTCCTTTTCTTCTTTCCGTGACGCCAAGTATGATCACTTGAGAAAACTTGAGAAAGGGACCGAGAATTTGAAACTGTTTAAGGCTGATTTACTGGACTATGAATCTCTGCATTCTGCGATCGCAGGATGTGATGGAGTTTTCCATGTCGCCAGTCCAGTTCCTCACACAACTTCATCAAACCCTGAGACAGAAGTGATTGAACCTGCTGTAAAGGGCACACGTAATGTGCTTGAAGCATGTGTGGATGCAAAAGTTAAGCGAGTTGTTGTAGTATCGTCTGTTGCTGCAGTGTTTTTCAATCCCAGCTGGCCTCAAGGTCGAGTAATGGATGAAAGTTGTTGGTCTGACAAGGAGTACTGCAAAGCTACCAAGAACTGGTATTTTCTGGCAAAAACAGAAGCTGAAAGTGAAGCCTGGGAGTTTGCGAGAAGACGTGGGCTTGACGTTGTGACTATTTGTCCTACCCTCGTTATCGGGCCGATTTTGCAGCCAACAGTCAACGCCAGCAGCATGGTTCTTCTCAGAATTCTTAAAGAAGGACTTGAGACGTTGGAAAACAGGCCACGAATGTTGGTAGACGTACGAGACGTAGCAGAGGCGTTAGTTGTTTTATATGAGAAGGGGGAGGCAGAAGGAAGGTACATTTGTACATCGCATACAATGGAGACAAGGGAGCTGGTGGATGCATTGAAGAAGAAGTACCCTGATTATAGCTATCCAAAGACGTTGAGTGAAGGGAATGAAAAGGCGGTAAGTCTGAGCTCGGAGAAGCTGCAAGGGTTGGGTTGGAAGTGTCGGGCGCTGGAGGAGACGCTTGCCGATGCTGTGAAGAGCTTCAAAGACGCCGGTATGTTGGAGTGA 993 47.63 MATVAMKGKVCVTGAGGFIGSWVVKLLLSRDYIVHGTVREPGNHSFSSFRDAKYDHLRKLEKGTENLKLFKADLLDYESLHSAIAGCDGVFHVASPVPHTTSSNPETEVIEPAVKGTRNVLEACVDAKVKRVVVVSSVAAVFFNPSWPQGRVMDESCWSDKEYCKATKNWYFLAKTEAESEAWEFARRRGLDVVTICPTLVIGPILQPTVNASSMVLLRILKEGLETLENRPRMLVDVRDVAEALVVLYEKGEAEGRYICTSHTMETRELVDALKKKYPDYSYPKTLSEGNEKAVSLSSEKLQGLGWKCRALEETLADAVKSFKDAGMLE 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 114350 117236 - CmoCh09G000170.1 Cmo09g00017 388019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00017 330 Gene3D - 3 330 - -
Cmo09g00017 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 324 IPR036291 -
Cmo09g00017 330 CDD FR_SDR_e 10 307 - -
Cmo09g00017 330 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 6 328 - -
Cmo09g00017 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 328 - -
Cmo09g00017 330 Pfam NAD dependent epimerase/dehydratase family 10 254 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00017 Cmo-Chr9:114350 Cmo14g01075 Cmo-Chr14:5965793 6.63E-94 dispersed
Cmo09g00017 Cmo-Chr9:114350 Cmo14g01074 Cmo-Chr14:5943038 6.82E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00017 - - bhj:120087265 544.658