Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00029 ATGGGCCTCAAAGTGCTCTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGCCTCTTCACCGACGCCTACGATCTCTTCAGCATCACTCCCGTTATGACCCTCGTCGGACGTGTGTACTACCAGGACAAACACTACGAGATTCCCGCCGCCGTCAAATCCGCCATGCTCGCCGTCGCCCTTCTCGGCACCGCCACGGGTCAAGTGGTGTTCGGCATACTCGGAGATCGAGTGGGACGACGGCGCGTGTACGGACTCGCATTGGCGCTGATGGTGCTGAGTTCCATCGGATGTGGGTTCTCAATCTGCACCACAAGGAGCTGCGTCCTTGTCAGCCTAGGGTTCTTCAGGTTCCTTCTGGGACTGGGAATTGGGGGAGATTACCCATTGTCGGCGACCATAATGTCGGAGTTCGCCAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTCGGGATCTTGGCCAGCTCCACGGTGACCATGATCGTGTGCTCCATATTCGATCGGGCCTCCAATTACCCACCCAGCAATCATACCCCCATGGGGGCGGATATTGCTTGGAGGTTGATTCTCCTGCTCGGCGCTCTTCCGGCGGCGATGACTTATTACTGGCGAATGATGATGCCGGAAACCGCCAGTTCGTGTGGAAATTATCGGACCAACCAAATTGAGCGGTTGACTTTCTTGGTCTTAAAAATAATTCTCGAGAGTAGATACACAGCTCTGGTTGAGCGGAATGTGGCACAAGCGGCGAAGGACATGGAGAAGGTGTTGGATGTGTCGTTGGCTGATATCACCGAGGACAGCCCTGTTTCCCCTCCCCCTCCAAATTTCCCCTTCTTTTCCAACGAATTTCTCCGTCGCCACGGCCGCGACCTTCTCTCCTGCGCCGCCGCTTGGTTCCTCGTCGACGTTGTGTTCTACAGCAGCAACCTCTTCCAATCCAGAATCTATACCCAATTCCTTCCCCCAAAACTCAGCCGCAACGTCTACCGAGACGCCTTCAACGAAGCCAAACTCCAAGCCATCGTGGCCGTCTGTTCCACCATTCCTGGCTACTGGGTCTCCGTCTATTTCATCGACCGACTCGGCCGAGTGAAAATCCAAATCATGGGGTTTCTCTTCATGGGCATTGGCTATTTCGCCATCGCCATTCCCTACAACAGATACTGGGACTCCGATCACAAATTTGGCTTCATGGTAATCTACTGCCTCACATTCTTCTTCTCAAACTTCGGCCCCAACACCACCACTTTCATTCTCCCTGCCGAGCTCTTTCCCGCCAGGTTCAGATCCACCTGCCATGGAATCTCCGGCGCGGCTGGCAAAATCGGGGCCATCATCGGGGCCGTGGGGTTCCTTTGGGCTTCGCACGACCGGTCGGATAATGGAATTGGGATGCAGGCGTCGCTGATAATACTTGGTGGGGCGAGTCTGGTGGGAGTGGCGGTGACGTATTTGTTCACCAGAGAGACCACCGGAAGGTCGTTGGAAGAGAACGAGAAGGAAGATGAGTACGCTGGAGTTTGGTTTATAAGGTTGTTTCTCCACAATAATACTGCTTCTGCTTCCTCCCGTCTGTCTGTTGGTGAACGCGAGGACATGTCGTCACGTTCAACCGCCAACTCCATTCGAAGTAGTACACCAATTCATTAG 1704 54.4 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPVMTLVGRVYYQDKHYEIPAAVKSAMLAVALLGTATGQVVFGILGDRVGRRRVYGLALALMVLSSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASSTVTMIVCSIFDRASNYPPSNHTPMGADIAWRLILLLGALPAAMTYYWRMMMPETASSCGNYRTNQIERLTFLVLKIILESRYTALVERNVAQAAKDMEKVLDVSLADITEDSPVSPPPPNFPFFSNEFLRRHGRDLLSCAAAWFLVDVVFYSSNLFQSRIYTQFLPPKLSRNVYRDAFNEAKLQAIVAVCSTIPGYWVSVYFIDRLGRVKIQIMGFLFMGIGYFAIAIPYNRYWDSDHKFGFMVIYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRSDNGIGMQASLIILGGASLVGVAVTYLFTRETTGRSLEENEKEDEYAGVWFIRLFLHNNTASASSRLSVGEREDMSSRSTANSIRSSTPIH 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 139751 142105 + CmoCh09G000290.1 Cmo09g00029 388031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00029 567 Pfam Major Facilitator Superfamily 27 466 IPR011701 GO:0022857|GO:0055085
Cmo09g00029 567 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 252 521 - -
Cmo09g00029 567 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 1 229 - -
Cmo09g00029 567 SUPERFAMILY MFS general substrate transporter 9 520 IPR036259 -
Cmo09g00029 567 CDD MFS_PhT 22 508 - -
Cmo09g00029 567 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016021|GO:0022857|GO:0055085
Cmo09g00029 567 MobiDBLite consensus disorder prediction 542 567 - -
Cmo09g00029 567 Gene3D MFS general substrate transporter like domains 293 525 IPR036259 -
Cmo09g00029 567 Gene3D MFS general substrate transporter like domains 17 252 IPR036259 -
Cmo09g00029 567 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 509 IPR020846 GO:0022857
Cmo09g00029 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 252 521 - -
Cmo09g00029 567 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00029 Cmo-Chr9:139751 Cmo17g00165 Cmo-Chr17:963739 0 dispersed
Cmo09g00029 Cmo-Chr9:139751 Cmo06g01332 Cmo-Chr6:9921850 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00029 K08176 - csv:101218554 870.537