Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00090 ATGCAAACCATTTCTTCTTGTGTCTTCCTTTTGGTTTGTGTCATCTTCTTGCTTCTTTCTGAAAATGCTAAAATAGCTGCTGCTGCAGCTGGGAACAATGGCGTTTATATCGTCTACATGGGATCCGCGTCCAGGACTGATTTCCTTCGCCTTCTTACCTCTGTCAACAGGCGGAATGGAAACGCAGTGGTGCGGACTTATAAACATGGGTTCACAGGATTCGCAGCTCGTCTGTCAGAGCAGGAAGCCCATGCCATGAGACAAAGGCCTGGAGTTGTTTCGGTCTTCCCAGATCCAATACTGAAGCTCCACACAACTCATTCATGGGATTTCTTGGTCAGTCAGACAAGCGTCAAAATCGACAGCGCTCCCAAGGCAGATCCCCCGACCTCTTCCTCTCAGCCGTTCGATACCATTATCGGCATCTTGGACACCGGTATCTGGCCGGAATCCGAGAGTTTTAGAGACGAGGGCATGCCTCCGATACCGTCGAGGTGGAAAGGTACGTGCATGGCTGGCGATGACTTCACTTCCTCCAACTGTAACAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATAAGGTTCCACTCACCTCGAGACGGAGCTGGACATGGAACCCACGTGGCTTCAACAGCGGCCGGCAGTGCCGTGGCTAATGCATCCTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTATAGAGTCTGTATGGCCGATGGTTGTCATGGATCGTCAATCCTGGCAGCGTTTGATGATGCCATTAACGATGGGGTCGATGTATTATCCTTATCTCTCGGTGCGCCCAACTACTACAAACCGGAATTGACGACCGACCCCATTGCCATCGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACTCCGGGATCGGTGGTGAACGACGCGCCATGGATTCTAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGCTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTGAAAGCTCTCCTGTATACCCGCTGATACATGGCAAATCGGCCAACAAATCGAGTACCAGTGAAGACAGTGCGAGGATTTGTTCTGAAGGCTCCATGGACGAAGCTCTTGTGAAGGGGAAGATAGTTATTTGTGAGAGCAGTGAGGAAGGAGGCGGTTCCTATTGGCAAGGTCAGGCTGAGACAGTGGAGAGCCTTGGAGGGGTCGGGATAGTTCTGATTGATGACCAAACAAAGCTAGTGGCAGAGAAATTTACTTCTCCCATCACCGCTATTAGCTCAAAGGATGGCGATGAGGTCCTTGCCTATGTTCACTCAAGCAGGAACCCAGTTGCTACAATCCTGCCCACCCTGACCGTAATAAACTATAAGCCAGCGCCCGCTATAGCATACTTTTCATCCAGAGGGCCCAATCCCGCAGTATTAAACATGATCAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGAAATGACACGAACTCTACTCCGCAACCAGAAAATTCGCCGCTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCCGGCGTAGTAGCCATGGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATCAAGTCGGCCATCATGACAACAGCAATCCAAACGAATAACTTGGAATCACCGATGACTTTGGATACGGGATCAGTAGCTACACCTTATGATTATGGGGCAGGAGAGATATCAACCACCGGAGCATTAAAACCAGGACTAGTCTATGAAACTAGTACAACTGACTACTTAATCTACCTTTGTGGCCGAGGCTATAACCGGTCCACCATAAAGAGCATCGCAAATACTGTTCCTGATGGGTTTGATTGCCCCAAGGATTCTAATGCAGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGAAAGGCAGCGAAAGCAAGAAAATAGTGAGAACAGTTACAAATGTTGGTGGTGATGGTGCAACAGTTTACAAAGTCAGTGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGATTCCAGAGAAATTGGAATTTTCAAAGAACAATCAGAAGCAGAGTTACAAAGTGGTGTTCACCTCAACTGTGTCCACACTGAAGAAAGAAGCCTTTGGTTCAATAACTTGGAGCAATGGAAAACATCGAGTCCGGAGTCCATTTGTGGTAACCAGTGAGAGTAGTAAGTCAGAAGATTAG 2319 48.86 MQTISSCVFLLVCVIFLLLSENAKIAAAAAGNNGVYIVYMGSASRTDFLRLLTSVNRRNGNAVVRTYKHGFTGFAARLSEQEAHAMRQRPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDSAPKADPPTSSSQPFDTIIGILDTGIWPESESFRDEGMPPIPSRWKGTCMAGDDFTSSNCNRKIIGARFYESSESDGIRFHSPRDGAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCHGSSILAAFDDAINDGVDVLSLSLGAPNYYKPELTTDPIAIGAFHAVEKGITVVCSAGNDGPTPGSVVNDAPWILTVAASTIDRDFESDVVLGNKKVIKGEGINFSALESSPVYPLIHGKSANKSSTSEDSARICSEGSMDEALVKGKIVICESSEEGGGSYWQGQAETVESLGGVGIVLIDDQTKLVAEKFTSPITAISSKDGDEVLAYVHSSRNPVATILPTLTVINYKPAPAIAYFSSRGPNPAVLNMIKPDISAPGVNILAAWLGNDTNSTPQPENSPLFNVISGTSMSCPHVSGVVAMVKSQNPTWSPSAIKSAIMTTAIQTNNLESPMTLDTGSVATPYDYGAGEISTTGALKPGLVYETSTTDYLIYLCGRGYNRSTIKSIANTVPDGFDCPKDSNADYISNMNYPTIAVSELKGSESKKIVRTVTNVGGDGATVYKVSVDAPGEVDVKVIPEKLEFSKNNQKQSYKVVFTSTVSTLKKEAFGSITWSNGKHRVRSPFVVTSESSKSED 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 416229 419837 + CmoCh09G000900.1 Cmo09g00090 388092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00090 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 104 IPR037045 -
Cmo09g00090 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 765 IPR045051 -
Cmo09g00090 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 41 765 - -
Cmo09g00090 772 ProSiteProfiles Serine proteases, subtilase domain profile. 108 614 - -
Cmo09g00090 772 CDD Peptidases_S8_3 101 581 IPR034197 -
Cmo09g00090 772 Pfam Fibronectin type-III domain 665 763 IPR041469 -
Cmo09g00090 772 Pfam Peptidase inhibitor I9 35 104 IPR010259 -
Cmo09g00090 772 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cmo09g00090 772 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Cmo09g00090 772 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Cmo09g00090 772 Gene3D - 631 766 - -
Cmo09g00090 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Cmo09g00090 772 ProSitePatterns Serine proteases, subtilase family, histidine active site. 210 220 IPR022398 -
Cmo09g00090 772 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252|GO:0006508
Cmo09g00090 772 SUPERFAMILY Protease propeptides/inhibitors 35 102 - -
Cmo09g00090 772 Gene3D - 339 484 - -
Cmo09g00090 772 SUPERFAMILY Subtilisin-like 129 615 IPR036852 GO:0004252|GO:0006508
Cmo09g00090 772 CDD PA_subtilisin_like 345 477 - -
Cmo09g00090 772 Pfam Subtilase family 138 587 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00090 Cmo-Chr9:416229 Cmo17g00660 Cmo-Chr17:6842754 0 dispersed
Cmo09g00090 Cmo-Chr9:416229 Cmo05g00488 Cmo-Chr5:2294562 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00090 K25898 - csv:101213415 1278.85