Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo09g00095 | ATGGGAAAACAAATTTGGTTCATATTATATCTTCTAACCATCCAAATTTCAATATCAGGAGTATTATCCACCACTTTCAGCATAGTGAATAAATGTGAGTACACAGTTTGGCCGGGAATTCTCTCCAACGCCGGAGTTCCACCACTTCCCGCCACCGGCTTCGTCCTCGCTGCTGGCGACTCCAAAACAATCTCTGCTCCGGGGTCATGGGGGGGCCGATTCTGGGGCCGGACCCACTGTTCACAAGACTCCAATGGAAAATTCTCTTGCCTCACTGGTGACTGCGGCTCCGACAAGGTCGAGTGCGGCGGGAACGGCGCGAAGCCGCCAGCTACTCTGGCGGAGTTCACCCTCGATGGCGCTGGCGGCCTTGACTTCTTCGATGTGAGTTTGGTCGATGGTTACAATATTCCTATGCTGGTTGTCCCGCAGGGCGGCACCGGCGAGAAATGTGTAAGCACGGGGTGCGTTGTGGATTTGAACGGCGCGTGTCCTCAAGAGCTCAAGGTTTTCAGCGTGGACGGCGGAGAGAACGTCGCGTGTAAAAGCGCGTGTGAAGCTTTCAACGCACCGCAGTACTGTTGCAGTGGCGAGTACGCGACACCCGATACTTGCAAACCATCTGCGTACTCGCAGGTGTTCAAAAGCGCGTGTCCACGCGCTTACAGCTACGCTTACGACGACAAAACCAGCACGTTTACATGTGCCGACGCCGATTATATCATCACATTCTGCCCTTCACCCAACACGAGTCAGAAATCAACGGAAGGTCACAATACAAGCACGCCGGCAATTAATGGCGGCAACGACACTATGGTTTACGAAGGGGCTGGATATGATCTAAGCAGCGCGTCGAGAACAACGCTCCGCGGTATACTGGGGGTAGCCATTGCCACGGTGTCCATTCTTCAATCTCGGCAGCTCTTTTGA | 930 | 53.76 | MGKQIWFILYLLTIQISISGVLSTTFSIVNKCEYTVWPGILSNAGVPPLPATGFVLAAGDSKTISAPGSWGGRFWGRTHCSQDSNGKFSCLTGDCGSDKVECGGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNIPMLVVPQGGTGEKCVSTGCVVDLNGACPQELKVFSVDGGENVACKSACEAFNAPQYCCSGEYATPDTCKPSAYSQVFKSACPRAYSYAYDDKTSTFTCADADYIITFCPSPNTSQKSTEGHNTSTPAINGGNDTMVYEGAGYDLSSASRTTLRGILGVAIATVSILQSRQLF | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 456782 | 458832 | - | CmoCh09G000950.1 | Cmo09g00095 | 388097 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo09g00095 | 309 | PANTHER | OS03G0233200 PROTEIN | 11 | 270 | IPR001938 | - | |
| Cmo09g00095 | 309 | SMART | tha2 | 26 | 246 | IPR001938 | - | |
| Cmo09g00095 | 309 | SUPERFAMILY | Osmotin, thaumatin-like protein | 24 | 247 | IPR037176 | - | |
| Cmo09g00095 | 309 | PANTHER | BNAA02G17480D PROTEIN | 11 | 270 | - | - | |
| Cmo09g00095 | 309 | Gene3D | Thaumatin | 24 | 246 | IPR037176 | - | |
| Cmo09g00095 | 309 | Pfam | Thaumatin family | 30 | 246 | IPR001938 | - | |
| Cmo09g00095 | 309 | CDD | TLP-PA | 25 | 245 | - | - | |
| Cmo09g00095 | 309 | PIRSF | PR5 | 1 | 282 | IPR001938 | - | |
| Cmo09g00095 | 309 | PRINTS | Pathogenesis-related protein signature | 25 | 37 | IPR001938 | - | |
| Cmo09g00095 | 309 | PRINTS | Pathogenesis-related protein signature | 73 | 84 | IPR001938 | - | |
| Cmo09g00095 | 309 | PRINTS | Pathogenesis-related protein signature | 125 | 141 | IPR001938 | - | |
| Cmo09g00095 | 309 | PRINTS | Pathogenesis-related protein signature | 236 | 245 | IPR001938 | - | |
| Cmo09g00095 | 309 | ProSiteProfiles | Thaumatin family profile. | 23 | 246 | IPR001938 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo05g00315 | Cmo09g00095 | CCT | |
| Cmo05g00315 | Cmo09g00095 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo04g01705 | Cmo-Chr4:8633494 | Cmo09g00095 | Cmo-Chr9:456782 | 5.57E-88 | dispersed | |
| Cmo09g00095 | Cmo-Chr9:456782 | Cmo20g00761 | Cmo-Chr20:3822026 | 3.90E-121 | dispersed | |
| Cmo16g01286 | Cmo-Chr16:9159750 | Cmo09g00095 | Cmo-Chr9:456782 | 7.98E-94 | dispersed | |
| Cmo01g02037 | Cmo-Chr1:14276057 | Cmo09g00095 | Cmo-Chr9:456782 | 2.37E-23 | transposed | |
| Cmo01g02036 | Cmo-Chr1:14274908 | Cmo09g00095 | Cmo-Chr9:456782 | 1.45E-161 | wgd | |
| Cmo12g00355 | Cmo-Chr12:2200133 | Cmo09g00095 | Cmo-Chr9:456782 | 5.81E-87 | wgd | |
| Cmo03g00705 | Cmo-Chr3:6122594 | Cmo09g00095 | Cmo-Chr9:456782 | 1.17E-101 | wgd | |
| Cmo05g00314 | Cmo-Chr5:1394117 | Cmo09g00095 | Cmo-Chr9:456782 | 9.80E-154 | wgd | |
| Cmo07g00418 | Cmo-Chr7:1899508 | Cmo09g00095 | Cmo-Chr9:456782 | 6.53E-97 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo09g00095 | - | - | csv:101214136 | 565.844 |