Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g00104 | ATGGCGCTCTTAACTTCCCACCACAATAAACGCCGAAAAAGGCACAAAAACCCATCACCGCCGCCGCCGCCGCCGCCCTCCGCCCAGTCGTCATGGGACCAGATCAAGAGCCTCCTCACCTGCAAACAGATCGAGACTTCGAGAGTTCACGAGCCGGTGAAACGCTCGCCGGCGTACTCGAAGTTGGGGTCTTCTTGCAGCTCCATATGTAGCTTCAGAGACGTGGTTCATGGCAATGCCAAAGTGGTTCATAGAGCCGACAACTCTCCCGAAAGCAGCTCCGTCGGACAGGAAACCAGGTTGCTTCATAGAAAAGCCCCAAACGGTTCCTCATCTCGTTCTTTGACGGCGCCGACACCTGGCAGAACCAAACACGCTGCTTCAGCTTCTGCTTCTGCTTCCTACTCCTCTTCTTCCAGAGGAATCCAATTACGAAAGCTCTCCGGGTGTTATGAATGCCACACCATCGTCGACCCTACCAGGTACCCAATTCCGAGGAGTTCTATACGTCCTTGTCCTCACTGTGGAGAGGTGTTCCCGAAGCCTGAAACCTTGGAGCTTCACCAATTAGTTCGCCACGCTGTATCCGAGTTGGGTCCTGACGATTCGGGTCGAAACATCGTGGAGATAATTTTCAAGTCAAGCTGGCTGAAAAAGGACCGCCCCATTTGCAAGATCCAACGGATATTAAAGGTCCACAATACCCAACGCACCATCCAACGCTTCGAGGACTGCCGTGATGCAGTGAAGACACGTGCGCTCAACAGCACCAAAAAAAACCCGCGCTGTGCGGCTGACGGCAATGAGCTGTTGAGGTTCCATTGTAGTGCCTTGTTGTGCGACCTCGGCTCACGTGGCTCTACCGGCTTATGCGGCTCGATACCCGGCTGCGGTGTCTGCACCGTCATCCGCCACGGATTCCAGTGCAAGCCCGGTGGGGTCCCTGGCGTACAGACTACTGCCAGTAGCGGTAGGGCCCATGATTCGTTCGGATGCAGCGATGGTCGGCGGCGGGCGATGTTGGTGTGCCGTGTCATCGCCGGGAGAGTCAAGCGTATGGCAGAAGATGGGGCAGGAACAACGACGACAGAGGAGGAGAACATGTCGGCGGCGGGGTCATACGACTCCGTTTCACGACACTCCGGGATGTACTCGAATCTGGAGGAGCTCATCATTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTCGTCATCTACGAAGCCCTCCAAACCTAA | 1236 | 55.34 | MALLTSHHNKRRKRHKNPSPPPPPPPSAQSSWDQIKSLLTCKQIETSRVHEPVKRSPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQETRLLHRKAPNGSSSRSLTAPTPGRTKHAASASASASYSSSSRGIQLRKLSGCYECHTIVDPTRYPIPRSSIRPCPHCGEVFPKPETLELHQLVRHAVSELGPDDSGRNIVEIIFKSSWLKKDRPICKIQRILKVHNTQRTIQRFEDCRDAVKTRALNSTKKNPRCAADGNELLRFHCSALLCDLGSRGSTGLCGSIPGCGVCTVIRHGFQCKPGGVPGVQTTASSGRAHDSFGCSDGRRRAMLVCRVIAGRVKRMAEDGAGTTTTEEENMSAAGSYDSVSRHSGMYSNLEELIIFNPKAILPCFVVIYEALQT | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 494843 | 496899 | - | CmoCh09G001040.1 | Cmo09g00104 | 388106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g00104 | 411 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 172 | 193 | IPR013087 | - | |
Cmo09g00104 | 411 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 170 | 198 | IPR013087 | - | |
Cmo09g00104 | 411 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 21 | 410 | - | - | |
Cmo09g00104 | 411 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 21 | 410 | - | - | |
Cmo09g00104 | 411 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cmo09g00104 | 411 | MobiDBLite | consensus disorder prediction | 83 | 132 | - | - | |
Cmo09g00104 | 411 | MobiDBLite | consensus disorder prediction | 86 | 132 | - | - | |
Cmo09g00104 | 411 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cmo09g00104 | 411 | MobiDBLite | consensus disorder prediction | 46 | 65 | - | - | |
Cmo09g00104 | 411 | Gene3D | - | 194 | 408 | - | - | |
Cmo09g00104 | 411 | SUPERFAMILY | ADP-ribosylation | 195 | 407 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g02027 | Cmo09g00104 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00760 | Cmo-Chr2:4756462 | Cmo09g00104 | Cmo-Chr9:494843 | 7.46E-65 | dispersed | |
Cmo04g02449 | Cmo-Chr4:18141668 | Cmo09g00104 | Cmo-Chr9:494843 | 1.60E-109 | dispersed | |
Cmo09g00104 | Cmo-Chr9:494843 | Cmo15g00715 | Cmo-Chr15:3476055 | 3.28E-110 | dispersed | |
Cmo01g02027 | Cmo-Chr1:14238762 | Cmo09g00104 | Cmo-Chr9:494843 | 1.38E-161 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10319 | None | None | None | None | Cmo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g00104 | - | - | csv:101222539 | 662.914 |