Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo09g00112 | ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGCCACATTGTCAGGCTCAGGCAAATGCTCCGACGGTGGCGCAACAAGGCCCGAATGTCTGCTAACCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGCGTTGGAACCAGCTGCCGGCGGTTCGTCGTCAGAGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCCGAAGAGGAGTACGGGTTCACCAACCAAGGCCCGTTGGCGATCCCTTGCGACGAGTCGGTTTTCGAGGAAGTCATCCGGTTCATCTCCAGATCCGATTCGCCCAACTCGGGGCGGTTCGTGAAATTAGACGAATTTCAAACTTACTGCCATATCGGAATCAGAACCGGCCTCGATTTGTGGCCGGAATCTCGGCCTTTGCTTCATGGGTTAGCCGAGAAATCCATCTGGTAA | 453 | 55.63 | MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSDSPNSGRFVKLDEFQTYCHIGIRTGLDLWPESRPLLHGLAEKSIW | 150 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 530087 | 530539 | - | CmoCh09G001120.1 | Cmo09g00112 | 388114 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo09g00112 | 150 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 6 | 143 | - | - | |
| Cmo09g00112 | 150 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 6 | 143 | IPR003676 | GO:0009733 | |
| Cmo09g00112 | 150 | Pfam | Auxin responsive protein | 16 | 101 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g00358 | Cmo-Chr2:1804316 | Cmo09g00112 | Cmo-Chr9:530087 | 4.58E-58 | dispersed | |
| Cmo09g00112 | Cmo-Chr9:530087 | Cmo19g00716 | Cmo-Chr19:7493864 | 2.88E-66 | dispersed | |
| Cmo01g02020 | Cmo-Chr1:14202814 | Cmo09g00112 | Cmo-Chr9:530087 | 1.23E-102 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo09g00112 | K14488 | - | csv:101216342 | 303.523 |