Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g00123 | ATGGCCGATATTGGGAGCTCAGCTTCTGGGAGCACAATGTGGTGCTCCATTCCCGAGAAGCTTCAGCTCCATGCCGCCATGCTGGCCTTGCAGTTTGGCTACGCTGGCTTCCACGTTGTCTCAAGGGCTGCCCTCAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTACAGGAACATCATTGCCTTTCTCCTCCTCCTTCCCTTTGCATATTTCCTCGAAAAGAAGGAACGCCCTCCCATTTCTCTCAATTTCCTCCTTCAATTCTTCCTTCTTGCCCTCGTTGGAATCACGGCCAATCAAGGGTTCTACTTGCTAGGTTTGGAGCACACGTCGCCGACGTTTGCATCGGCTATACAAAACTCGGTTCCGGCCATTACATTTCTCATGGCAGCATTGCTCCGGATAGAACAAGTGCGATTAAACAGGAAAGATGGTATAGCGAAAGTGATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGGTGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTGTTTTCATCGCTGCTATTGCTGAGAGAGATTCTCAGGCTTGGCTTTTCCACTCCGGTGGCGAAATTTTCAGCGTTCTCTATGCAGGAGTGGTAGCTTCGGGAATTGCTTTCGCGGTGCAGATATGGTGCATTCAAAGAGGTGGCCCGGTGTTCGTGGCTGTTTATCAACCAGTTCAGACACTCGTTGTGGCGGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGAGGGATCATCGGGGCAGTGCTGATCATCACCGGCTTATACTTCGTCCTATGGGGCAAAAGCGAAGAGAGAAAATTTGCACTTGAGAAGGCAGCCATACTCTCCGCTTCAGACCACAGTAACAGCAGAGCCCCCGCTCACATCAAGCCCTCCATGACTCAGCCACTTCTCATCCACTCAACAAACGACAACGTTTGA | 1161 | 50.3 | MADIGSSASGSTMWCSIPEKLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPISLNFLLQFFLLALVGITANQGFYLLGLEHTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEEFFLGGIIGAVLIITGLYFVLWGKSEERKFALEKAAILSASDHSNSRAPAHIKPSMTQPLLIHSTNDNV | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 572730 | 574996 | + | CmoCh09G001230.1 | Cmo09g00123 | 388125 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g00123 | 386 | PANTHER | WAT1-RELATED PROTEIN | 15 | 369 | IPR030184 | GO:0016021|GO:0022857 | |
Cmo09g00123 | 386 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 57 | 167 | - | - | |
Cmo09g00123 | 386 | PANTHER | WAT1-RELATED PROTEIN | 15 | 369 | - | - | |
Cmo09g00123 | 386 | Pfam | EamA-like transporter family | 27 | 164 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo09g00123 | 386 | Pfam | EamA-like transporter family | 200 | 338 | IPR000620 | GO:0016020|GO:0016021 | |
Cmo09g00123 | 386 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 245 | 343 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo09g00123 | Cmo12g00386 | CCT | |
Cmo05g00280 | Cmo09g00123 | CCT | |
Cmo09g00123 | Cmo12g00386 | ECH | |
Cmo05g00280 | Cmo09g00123 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00123 | Cmo-Chr9:572730 | Cmo11g00300 | Cmo-Chr11:1446008 | 9.59E-130 | dispersed | |
Cmo09g00757 | Cmo-Chr9:3831540 | Cmo09g00123 | Cmo-Chr9:572730 | 9.57E-71 | dispersed | |
Cmo12g00386 | Cmo-Chr12:2398747 | Cmo09g00123 | Cmo-Chr9:572730 | 0 | wgd | |
Cmo05g00280 | Cmo-Chr5:1203071 | Cmo09g00123 | Cmo-Chr9:572730 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g00123 | - | - | csv:101218486 | 667.922 |