Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00123 ATGGCCGATATTGGGAGCTCAGCTTCTGGGAGCACAATGTGGTGCTCCATTCCCGAGAAGCTTCAGCTCCATGCCGCCATGCTGGCCTTGCAGTTTGGCTACGCTGGCTTCCACGTTGTCTCAAGGGCTGCCCTCAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTACAGGAACATCATTGCCTTTCTCCTCCTCCTTCCCTTTGCATATTTCCTCGAAAAGAAGGAACGCCCTCCCATTTCTCTCAATTTCCTCCTTCAATTCTTCCTTCTTGCCCTCGTTGGAATCACGGCCAATCAAGGGTTCTACTTGCTAGGTTTGGAGCACACGTCGCCGACGTTTGCATCGGCTATACAAAACTCGGTTCCGGCCATTACATTTCTCATGGCAGCATTGCTCCGGATAGAACAAGTGCGATTAAACAGGAAAGATGGTATAGCGAAAGTGATGGGAACAATATGCTGTGTTGCTGGGGCCACAGTGATCACTCTCTACAAAGGTCCAACCATATACAGCCCTGGTGCTTCGCTGCAAGCAGCCACCATCTCACCCATTTTTGCTTCACTTGGGGACGCAAACGGCAAAAGCTGGACCCTGGGCTGCATCTTCTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTTGTTTTGCAGGCCCCTGTTTTGAAAAAATACCCGGCTCGTCTCTCTGTCACTTCTTATACATGTTTCTTTGGGATCATCCAATTTGTTTTCATCGCTGCTATTGCTGAGAGAGATTCTCAGGCTTGGCTTTTCCACTCCGGTGGCGAAATTTTCAGCGTTCTCTATGCAGGAGTGGTAGCTTCGGGAATTGCTTTCGCGGTGCAGATATGGTGCATTCAAAGAGGTGGCCCGGTGTTCGTGGCTGTTTATCAACCAGTTCAGACACTCGTTGTGGCGGTCATGGCTTCCTTCGCGTTGGGTGAAGAGTTCTTCTTGGGAGGGATCATCGGGGCAGTGCTGATCATCACCGGCTTATACTTCGTCCTATGGGGCAAAAGCGAAGAGAGAAAATTTGCACTTGAGAAGGCAGCCATACTCTCCGCTTCAGACCACAGTAACAGCAGAGCCCCCGCTCACATCAAGCCCTCCATGACTCAGCCACTTCTCATCCACTCAACAAACGACAACGTTTGA 1161 50.3 MADIGSSASGSTMWCSIPEKLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPISLNFLLQFFLLALVGITANQGFYLLGLEHTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPGASLQAATISPIFASLGDANGKSWTLGCIFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVFIAAIAERDSQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEEFFLGGIIGAVLIITGLYFVLWGKSEERKFALEKAAILSASDHSNSRAPAHIKPSMTQPLLIHSTNDNV 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 572730 574996 + CmoCh09G001230.1 Cmo09g00123 388125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00123 386 PANTHER WAT1-RELATED PROTEIN 15 369 IPR030184 GO:0016021|GO:0022857
Cmo09g00123 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 167 - -
Cmo09g00123 386 PANTHER WAT1-RELATED PROTEIN 15 369 - -
Cmo09g00123 386 Pfam EamA-like transporter family 27 164 IPR000620 GO:0016020|GO:0016021
Cmo09g00123 386 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020|GO:0016021
Cmo09g00123 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 343 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo09g00123 Cmo12g00386 CCT
Cmo05g00280 Cmo09g00123 CCT
Cmo09g00123 Cmo12g00386 ECH
Cmo05g00280 Cmo09g00123 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00123 Cmo-Chr9:572730 Cmo11g00300 Cmo-Chr11:1446008 9.59E-130 dispersed
Cmo09g00757 Cmo-Chr9:3831540 Cmo09g00123 Cmo-Chr9:572730 9.57E-71 dispersed
Cmo12g00386 Cmo-Chr12:2398747 Cmo09g00123 Cmo-Chr9:572730 0 wgd
Cmo05g00280 Cmo-Chr5:1203071 Cmo09g00123 Cmo-Chr9:572730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00123 - - csv:101218486 667.922