Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00166 ATGGTTCTCTTTGCTGTTTCCCTTGTTGTTGTTGCTGCTCTTCTTCTTACAATCCTCCTGAAATTTCTCTACTCCACTTTCTGGCTTCCATGGAGGTTTCAAATCCACTTCCGAAAGCAGGGCATAAAGGGCCCTCCCTACCGTCCGATCATCGGCAACTCCACCGATATCCGCCGTCTGTTCGCGGAGGCACAATCTAAGCCGATTCCGTTTCACCACGATATACTCAGTCGCGCTCTCCCTTTTTACTTCCGGTGGTCCGGTGAGTACGGAAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCCATTTCCGACCCGGATCTAATTAAGGAAGTGCTTGTGAATACGCACGGGTCTTTTCGAAGGATCCAGTTCAACCCGCAGGCGAAGTTGCTTTTTGGAGAGGGACTGCTAGGACTGGACGGGGAAAAATGGGTCGCGCGTCGGAGAATTGCGAATCAGGCTTTCAACATCGAGCGCATAAAGGGGTGGGTACCCGAAATAGTTGCTAGTGTGTCGAATGTTCTGGAGAAATGGGAAGAGATGAAGGGCGGAATGGAGGAGATTGAATTGGACGTTCACAAAGAATTTCGTCGCCTCTCAGCCGACGTAATTTCAAGAACCGCATTTGGAAGTAACTTTGAAGAAGGCAAGCGCATCTTCAGTTTGCAGGAACAGCAAACACATCTCTTCTCCCAAGCAGTCAGAAGTGTTTATATTCCTGGCTTCAGATTTTTGCCGACGAAGAAGAACAGAGAAAGGTGGAGCCTGGAGAAAGAAACTCGGGAATCGATAAAAGAGCTGATTGAGGAAAACAGCAAAGGAAGGGAAAACTCAACTAATCTACTCAGCTTGTTAATGTCATCTTACAAGAACCAGAATGGGGAAGAAGAGAGACTTGGAGTGGAGGAAATCATTGATGAATGTAAGACATTCTATTTCGCGGGAATGGAAACAACTTCTCATCTTTTAACTTGGGCTCTTCTGCTACTAGCAAAGCATCCAGAGTGGCAAGATAAGGCCAGACAAGAAGTTCTCAACGTCTGCGCCCATAAAACACCTCCTGCGCCCGAGAATTTGAGCCAACTTAAGCTTGTAGGCATGATAATTAACGAAGCACTTCGACTTTATCCTCCAGCAGTGATGATGACGAGGCAGGCAGCGAAACAGGTGACACTAGGAAGCTTGGACATTCCTGGTGGCACAGAGCTGTTCTTGGCGTTGGCTGCTGTCCACCATGAGAAAGAGATTTGGGGAGAGGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACACTTGGCTTCCTTTCTGCCATTTTCGTTGGGTCCCAGGATTTGTGTAGGCCAAAACATGGCGTTGATTGAGGCCAAAGTCGCCCTGGCCATGATAATTCAACGATTCTCTGTTGCTGTTTCTCCAACCTACACTCATGCCCCTTTGCTTTTTGTAACCTTACAGCCTCAGTTTGGTGCTCACCTCCTTCTTAGGAGCTTATTGGTTTTATTCTGTGCTGGAGAAGAATCAAAGGGAGGCCCGTCTGTTTACGGGGCTAATATGCCATCTTATATGTCAAAACTACGAGCATCCGTTCAAATTCTAGGGTGGGAAGGCGGATTTAAAGGTTCATTGGAGCTGCTTTTTGGGCATCAGAAACTGTTGTGTGGCAATTCTAGTCTATTTCACTCGGTTCCTTATTCCTCACTTACAGAGTTGCATGCTCTCTTAAGACCTGGCACTATTTCGGGTGCTAGTTCAGAGCTAGTCAATCGCAGGAAGAATATCTCAGCTCTTGGAGCAATTTCTCGCACATTTTCTGTTCCTTCTGTTTCAGGCCCTGCATTTCAGACTTGTAGGTATCACATTGATTGTGCCGTTGCTGAATCCAATCAATTTTCATCTCACAGCAAGTGTCGAGACAAACCAATGGCTGCTTGTGGTTCTAAAGCTACACTTGGTGAATGTTCTTTTGGTAATTCAAGTTTTAGAAATGCACCCTCGTCTTCTTCAGCGATCAGTGCTAGTATTTGTTTTAACAATAGAAGTGTTAATAGATGTCGGAAAGCCAGCATGAGTTTGAAAAATCAAGAGCAGCCTAGCAACAATGTGATATATGGATACTTCACTTATGACGTTGCAAAGAGGTTTTGCAGTAGTTACCTACATACTATGTCGGGAGTCGGTGATCTTCATACTTCATCAACTTCTCAGTTTTCAGCTGGTTCTGCCCCCAATGTGTCATTTGATAATTCTGCACGGGAGGAACAACCTGTCAACTCTACTGATTCATCTGAACAGAATATCTCGATGGGCAAATCATTGAAACTGGTTTCTGGATCATGCTATCTACCCCATCCTGATAAAGAAGATACTGGAGGAGAGGATGCTCACTTTATCTGTGTAGATGAACAGGCCATAGGGGTGGCTGATGGTGTGGGTGGCTGGGCAGATCTTGGTGTTGATGCTGGACAGTATTCCCGAGAACTTATGTCTAATTCAGTTAGTGCAGTTCAGGAAGAACCCAAGGGCTCAATAGATCCAGCTAGAGTCTTGGAGAAGGCTCACTCAAAAACAAAAGCCAAAGGTTCCTCCACTGCTTGTATCATAGCGCTAACAGAACAAGGTCTCCATGCAATCAACTTAGGAGACAGTGGATTTATGGTGGTTAGAGACGGATGCACTGTCTTTAGATCTCCCGTGCAGCAGCATGATTTTAATTTCACCTTTCAATTGGAGAGTGGAAACAATGGAGATCTGCCTAGCTCTGGTCAGGTTTTCACAGTCCCTGTTGCTCCTGGAGATGTCATAATTGCTGGCACCGATGGACTCTTTGATAACTTGTACAACAACGAGATCACTGCAGTGGTGGTTCATGCCATGAAAGCAGGCTTAGGCACTCAGGTGACTGCCCAGAAGATAGCTGCTCTTGCACGCCAACGAGCTCTAGATAAAGACAGACAAACGCCTTTCTCCACTGCTGCTCAAGATGCTGGATTTCGCTATTATGGAGGCAAGCTTGACGACATCACAGTCGTCGTGTCATATGTTACGCGCTCTAATGATAACTCTCCCTTCCATTTCTATAAAAATCCACAGCAATCCATTCAACTCTCTACTCTGCTGCTTCACTCACGCCGTACTACGCCTGATTTCTCTATGGCCGGTCGTAAAGATAAATCACATTCAGCTCGCGTGTCTCGAGTCGTCATCGCCATCGCAATCGGAGTTTTTCTTGGGTGTTTTTTTGCTTTCTTCTATCCCCATGGACTTCTCCGCTCTGATCTGCCTCTCCAAAACCGTCGACTCGGGAAATCGGAGTTACAGGTTCAGTCTTCTTCCCCGTGCGAATCTTCGGACCGGTTCAAGAACCTTAAAGCCGACGTGGTTTCAATATTAGGGAAGAACTCCGTGTTGGAGAAGCGTATCAAGGATCTTGCGAGGGAGCTGAAGATTGTGGAACAATTAAAAGATCATGCTCAGAAGCAATATTTGGCGCTTGGCGAAAATCACAAGGCTGGTCCATTTGATAGTGTCAAAGGTCTTAGAACAAATCCCACCGTAATCCCTGATGAATCCGTGAATCCTCGATTGGCAAAGCTCCTGGAGAAAGTTGCTATTCAGAAGGAGCTGATTGTGACGCTTGCAAATTCTAATGTTAAATCTATGTTGGAGATTTGGTTTACCAGCATCCAAAATGTCGGTATACACAATTATTTGGTCGTGGCTCTGGACGACCAAACCGAAGAGTTCTGCGTATCCCATGATGTTCCTGTCTACAAGAGAGATCCAGACACGAGCATCGACTCGGTGGGAAAGCAAGGAGGCAACCATCAAGTCTCTGCATTGAAGTTTCACATTCTTAGGGAGTTCTTGCAACTGGGATACAGTGTTCTACTCTCAGACGTTGATATCGTCTACTTGCAGAACCCTTTCGATCATCTTTACCGCGATTCGGATGTGGAGTCGATGAGTGATGGTCACAACAATATAACAGCTTATGGATATAACGATGTATTTGATGAACCTGCCATGGGTTGGGCTAGATATGCGCACACTATGAGAATATGGGTTTACAACTCTGGTTTCTTCTTCATTAGGCCTACACTTCCTTCATTGGAGCTTTTGGACCGTGTTGCTGCTCGGCTTTCTCAAGAAAAGGCATGGGACCAAGCCGTTTTCAACGAGGAACTCTTTTATCCGTCTCGTCCCGGACGTGACGGTCTTCATGCCTCCAAGAGAACCATGGACATGTATCTCTTTATGAACAGCAAGGTACTTTTCAAGACTGTTCGAAAGAACCTGAATCTGAGACAGCTGAAACCCGTTATTGTTCATATAAATTACCATCCTGACAAGTATGCTAGAATGAAAGCAGTCGTCGAATTCTACGTCGATGGTAAGCAAAATGCTCTGGATCATTTTCCAGATGGTTCTGAATGA 4458 45.78 MVLFAVSLVVVAALLLTILLKFLYSTFWLPWRFQIHFRKQGIKGPPYRPIIGNSTDIRRLFAEAQSKPIPFHHDILSRALPFYFRWSGEYGKTFLYWFGSKPRLAISDPDLIKEVLVNTHGSFRRIQFNPQAKLLFGEGLLGLDGEKWVARRRIANQAFNIERIKGWVPEIVASVSNVLEKWEEMKGGMEEIELDVHKEFRRLSADVISRTAFGSNFEEGKRIFSLQEQQTHLFSQAVRSVYIPGFRFLPTKKNRERWSLEKETRESIKELIEENSKGRENSTNLLSLLMSSYKNQNGEEERLGVEEIIDECKTFYFAGMETTSHLLTWALLLLAKHPEWQDKARQEVLNVCAHKTPPAPENLSQLKLVGMIINEALRLYPPAVMMTRQAAKQVTLGSLDIPGGTELFLALAAVHHEKEIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNMALIEAKVALAMIIQRFSVAVSPTYTHAPLLFVTLQPQFGAHLLLRSLLVLFCAGEESKGGPSVYGANMPSYMSKLRASVQILGWEGGFKGSLELLFGHQKLLCGNSSLFHSVPYSSLTELHALLRPGTISGASSELVNRRKNISALGAISRTFSVPSVSGPAFQTCRYHIDCAVAESNQFSSHSKCRDKPMAACGSKATLGECSFGNSSFRNAPSSSSAISASICFNNRSVNRCRKASMSLKNQEQPSNNVIYGYFTYDVAKRFCSSYLHTMSGVGDLHTSSTSQFSAGSAPNVSFDNSAREEQPVNSTDSSEQNISMGKSLKLVSGSCYLPHPDKEDTGGEDAHFICVDEQAIGVADGVGGWADLGVDAGQYSRELMSNSVSAVQEEPKGSIDPARVLEKAHSKTKAKGSSTACIIALTEQGLHAINLGDSGFMVVRDGCTVFRSPVQQHDFNFTFQLESGNNGDLPSSGQVFTVPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMKAGLGTQVTAQKIAALARQRALDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYVTRSNDNSPFHFYKNPQQSIQLSTLLLHSRRTTPDFSMAGRKDKSHSARVSRVVIAIAIGVFLGCFFAFFYPHGLLRSDLPLQNRRLGKSELQVQSSSPCESSDRFKNLKADVVSILGKNSVLEKRIKDLARELKIVEQLKDHAQKQYLALGENHKAGPFDSVKGLRTNPTVIPDESVNPRLAKLLEKVAIQKELIVTLANSNVKSMLEIWFTSIQNVGIHNYLVVALDDQTEEFCVSHDVPVYKRDPDTSIDSVGKQGGNHQVSALKFHILREFLQLGYSVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHNNITAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFFIRPTLPSLELLDRVAARLSQEKAWDQAVFNEELFYPSRPGRDGLHASKRTMDMYLFMNSKVLFKTVRKNLNLRQLKPVIVHINYHPDKYARMKAVVEFYVDGKQNALDHFPDGSE 1485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 744605 755147 + CmoCh09G001660.1 Cmo09g00166 388168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00166 1485 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1217 1411 IPR029044 -
Cmo09g00166 1485 Gene3D - 794 918 IPR036457 -
Cmo09g00166 1485 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 Pfam Stage II sporulation protein E (SpoIIE) 810 1022 IPR001932 -
Cmo09g00166 1485 Pfam Nucleotide-diphospho-sugar transferase 1241 1462 IPR005069 -
Cmo09g00166 1485 SMART PP2C_SIG_2 796 1022 IPR001932 -
Cmo09g00166 1485 SUPERFAMILY PP2C-like 787 1019 IPR036457 -
Cmo09g00166 1485 PANTHER ARABINOSYLTRANSFERASE RRA3 1062 1485 IPR044290 GO:0016757|GO:0080147
Cmo09g00166 1485 Gene3D - 925 1028 IPR036457 -
Cmo09g00166 1485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Cmo09g00166 1485 Coils Coil 1141 1168 - -
Cmo09g00166 1485 Pfam Cytochrome P450 84 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 SMART PP2C_4 773 1020 IPR001932 -
Cmo09g00166 1485 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 ProSiteProfiles PPM-type phosphatase domain profile. 786 1022 IPR001932 -
Cmo09g00166 1485 PANTHER GLYCOSYLTRANSFERASE 1062 1485 - -
Cmo09g00166 1485 MobiDBLite consensus disorder prediction 747 774 - -
Cmo09g00166 1485 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00166 1485 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01305 Cmo-Chr1:10359721 Cmo09g00166 Cmo-Chr9:744605 1.66E-63 dispersed
Cmo01g01312 Cmo-Chr1:10410408 Cmo09g00166 Cmo-Chr9:744605 1.25E-59 dispersed
Cmo01g01412 Cmo-Chr1:11101518 Cmo09g00166 Cmo-Chr9:744605 8.26E-10 dispersed
Cmo04g00831 Cmo-Chr4:4146394 Cmo09g00166 Cmo-Chr9:744605 2.93E-142 dispersed
Cmo09g00166 Cmo-Chr9:744605 Cmo19g00661 Cmo-Chr19:7102099 0 dispersed
Cmo18g00773 Cmo-Chr18:9305345 Cmo09g00166 Cmo-Chr9:744605 6.13E-13 dispersed
Cmo01g01955 Cmo-Chr1:13903738 Cmo09g00166 Cmo-Chr9:744605 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00166 K17508 - cmos:111443307 958.747