Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00211 ATGTCCACGAGGAGTGAACATCATACAGTCCCGCTGTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTACTGAAGTCGGAATGCGAGAGGGTGGTCGGGGATGGAGTCTCTACATATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCCGCTGCTATTTATACTAAGGAAAATTTGTTGAACAATGTTTTAGCTGCTATTCCGTCAGATCTCAACAGAGACGAATGGGTTGCAGCATTGCCAAGGGCCTTGGTTGCTGGTTTTGTGAAGACGGACAAAGATTTCCAAGAGAAAGCACAAACATCAGGAACCACCGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGGGATTCCCGTTGCACGTTAGAATCAGCTGAAGGTGACATCTTCTACTTATCAGCAGATCATAGGCTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGCGGTGAGGTGGGCCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCAGGTGGCTTGTGTCTATCACGATCGATTGGTGATATGGATATTGGCGAGTTTATAGTGCCTGTACCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACTGCCTACGATTGCTGTCGGGGGATGCCGGTAGAAACTGCTGCTGCACAGATTGTTAAAGAAGCAGTACAGTCAAAGGGACTTCGCGATGATACTACATGCATTGTGATTGACATATTACCAAGGGAGAAACCATCTACTGCTTTGCCGCCAACGAAGAAGCAGGGAAAAAGAATGTTTAAATCAATGTTCCGCAAAAAGACTTCTGAATCATCTTCTCATCTTGATAAGGAATATAATGAGCCGAATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGAGGCGAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATCTCCATATATGCCGGCTCATCTAGCAGAGGAAAATTGCGTGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCTTCTGGAGAAAGACACAGCAGCGGAAGTGACTAG 1287 45.53 MSTRSEHHTVPLSVLLKRELAIEKIERPEIVHGQASQSKKGEDFTLLKSECERVVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGDIFYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKPSTALPPTKKQGKRMFKSMFRKKTSESSSHLDKEYNEPNVVEELFEEGSAMLSERLEAKYPICNMFKLFVCAVCQVEIQPREGISIYAGSSSRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGERHSSGSD 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 983713 987840 + CmoCh09G002110.1 Cmo09g00211 388213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00211 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
Cmo09g00211 428 SMART PP2C_SIG_2 54 293 IPR001932 -
Cmo09g00211 428 CDD PP2Cc 39 293 IPR001932 -
Cmo09g00211 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Cmo09g00211 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Cmo09g00211 428 SMART PP2C_4 17 291 IPR001932 -
Cmo09g00211 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Cmo09g00211 428 Pfam Protein phosphatase 2C 50 278 IPR001932 -
Cmo09g00211 428 Gene3D - 31 301 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01910 Cmo09g00211 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01566 Cmo-Chr4:8006180 Cmo09g00211 Cmo-Chr9:983713 0 dispersed
Cmo09g00211 Cmo-Chr9:983713 Cmo11g01302 Cmo-Chr11:8904360 6.83E-173 dispersed
Cmo01g01910 Cmo-Chr1:13709304 Cmo09g00211 Cmo-Chr9:983713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00211 - - csv:101211986 810.446