Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00261 ATGAATAAAGCTTGGAGCGAGATAAGAGAGTGCGTTGGGGAGAGTCGGCTGGTGGAGGAAGGCGATGTTAGCAGCCTAAAATACGTGGAAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGTAGCTCCTCTGTTGGTGCCACACGAATCCTCTGAAGAGTGTAGAATTGAAGGATTTGACATACCCAAAGGCAGGATGCTATTGGTGAATGTTTGGGCCATCCATAGGGACCCTCAACTGTGGGAGGATCCCACTAGCTTCCGACCTGAGAGGTTTCTGAATTGGGAAGCTGCCGAGTCCCACAAATGGGTGCTGTTTGGAGTGGGGAGGGGGGCTTGTCCTGGGGCTGCCCTCGCCCACCGTGTCGTGGGCTTGACGCTGGCCACTTTGATTCAGTGCTTTGAGTGGCCGAGAGTTGGCGAAGAGCCAATTAGAGATTTGTCCATGTCACAATTTAGTGCAACTTATTTTAGTTTGAATTAG 486 50.82 MNKAWSEIRECVGESRLVEEGDVSSLKYVEAIIYETLRLFPVAPLLVPHESSEECRIEGFDIPKGRMLLVNVWAIHRDPQLWEDPTSFRPERFLNWEAAESHKWVLFGVGRGACPGAALAHRVVGLTLATLIQCFEWPRVGEEPIRDLSMSQFSATYFSLN 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1159525 1160010 - CmoCh09G002610.1 Cmo09g00261 388263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00261 161 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 145 - -
Cmo09g00261 161 Pfam Cytochrome P450 3 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 145 - -
Cmo09g00261 161 Gene3D Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 PRINTS E-class P450 group I signature 114 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 PRINTS E-class P450 group I signature 104 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo09g00261 161 SUPERFAMILY Cytochrome P450 1 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00261 Cmo-Chr9:1159525 Cmo20g00988 Cmo-Chr20:5633295 3.32E-55 dispersed
Cmo09g00261 Cmo-Chr9:1159525 Cmo09g00263 Cmo-Chr9:1165145 3.78E-27 proximal
Cmo01g01862 Cmo-Chr1:13529829 Cmo09g00261 Cmo-Chr9:1159525 1.44E-64 wgd
Cmo03g00973 Cmo-Chr3:7332351 Cmo09g00261 Cmo-Chr9:1159525 3.42E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00261 - K13260 csv:101207002 244.588