Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00356 ATGAGCCTAGATGCCGCTGAGGATGAATCAACCTCTGAAATTCATATCCCAGCAGAGGTTGATTGGGATATGTTAGACAAATCCAAATTCTTTGTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACCGCCCTTTATCCTATTGTTGTCTTGAAAACTCGACTTCAGGTTTCTTCTACCAAGTTATCCTGCTTTAAAATGTCATATTCTATCATGCGCCATGAAGGCTTAAGAGGATTTTACAGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGGCAGCTCTTGAAGTTACCAAGAGTGGTGTTGGAAGTGCAACTATTAGGCTAGGTCTTTCAGACACCACAGCCATGGCTGTAGCTAATGCAGCTGCAGGGTTGAGCTCTGCCATGGCTGCTCAATTGGTCTGGACTCCAGTAGATGTTGTAAGCCAACGACTAATGGTTCAGGGCAGCTGTATCAATGCTAAGAACAGTGTTTCTAATCTTAATTCTTGCGTTTATAAAAACGGTATCGACGCGTTTAGAAAGATCATTTATGCTGATGGCTTGCGAGGATTGTATAGGGGATTTGGGATTTCAATATTGACATATGCTCCATCAAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCTCATAGATTCATTTGGAGTGGTCTAAGCTACTACACAAGTAAGAAGGATGAGAGTTGTATAAGTGGATATGGTTTTAAAGCAGATTCCAAGGCAACAGTGGCAGTTCAAGGCTTGAGTGCAACCTTTGCCAGTGGGGTTTGTGCTATGATAACAATGCCATTGGATACCATCAAGACCAGATTGCAAGTTTTGGATGGAGAAGAAAATGGCCAGAGACGCCCTCTAACAGCGTTGCAGACCGTAAGGAACTTGGTGAAGGACGGCGGTCTGAATGCTTGTTATAGAGGGCTTGGACCGAGGTGGGCTTCGATGGCTATGTCTGCAACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATCGTTTGAGCTGA 1047 44.03 MSLDAAEDESTSEIHIPAEVDWDMLDKSKFFVLGAALFSGVSTALYPIVVLKTRLQVSSTKLSCFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATIRLGLSDTTAMAVANAAAGLSSAMAAQLVWTPVDVVSQRLMVQGSCINAKNSVSNLNSCVYKNGIDAFRKIIYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRFIWSGLSYYTSKKDESCISGYGFKADSKATVAVQGLSATFASGVCAMITMPLDTIKTRLQVLDGEENGQRRPLTALQTVRNLVKDGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDRLS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1537744 1538790 + CmoCh09G003560.1 Cmo09g00356 388358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00356 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 346 - -
Cmo09g00356 348 Gene3D Mitochondrial carrier domain 29 347 IPR023395 -
Cmo09g00356 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 108 IPR018108 -
Cmo09g00356 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 339 IPR018108 -
Cmo09g00356 348 SUPERFAMILY Mitochondrial carrier 23 336 IPR023395 -
Cmo09g00356 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
Cmo09g00356 348 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Cmo09g00356 348 Pfam Mitochondrial carrier protein 250 343 IPR018108 -
Cmo09g00356 348 Pfam Mitochondrial carrier protein 34 107 IPR018108 -
Cmo09g00356 348 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Cmo09g00356 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Cmo09g00356 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Cmo09g00356 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02937 Cmo-Chr4:20803476 Cmo09g00356 Cmo-Chr9:1537744 7.46E-88 dispersed
Cmo08g00754 Cmo-Chr8:4770418 Cmo09g00356 Cmo-Chr9:1537744 4.73E-162 dispersed
Cmo09g00356 Cmo-Chr9:1537744 Cmo17g00679 Cmo-Chr17:6942765 7.42E-159 dispersed
Cmo01g01800 Cmo-Chr1:13244977 Cmo09g00356 Cmo-Chr9:1537744 7.33E-18 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00356 K15121 - csv:101213436 605.905