Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g00356 | ATGAGCCTAGATGCCGCTGAGGATGAATCAACCTCTGAAATTCATATCCCAGCAGAGGTTGATTGGGATATGTTAGACAAATCCAAATTCTTTGTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACCGCCCTTTATCCTATTGTTGTCTTGAAAACTCGACTTCAGGTTTCTTCTACCAAGTTATCCTGCTTTAAAATGTCATATTCTATCATGCGCCATGAAGGCTTAAGAGGATTTTACAGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCCTTTTACATGGCAGCTCTTGAAGTTACCAAGAGTGGTGTTGGAAGTGCAACTATTAGGCTAGGTCTTTCAGACACCACAGCCATGGCTGTAGCTAATGCAGCTGCAGGGTTGAGCTCTGCCATGGCTGCTCAATTGGTCTGGACTCCAGTAGATGTTGTAAGCCAACGACTAATGGTTCAGGGCAGCTGTATCAATGCTAAGAACAGTGTTTCTAATCTTAATTCTTGCGTTTATAAAAACGGTATCGACGCGTTTAGAAAGATCATTTATGCTGATGGCTTGCGAGGATTGTATAGGGGATTTGGGATTTCAATATTGACATATGCTCCATCAAATGCAGTTTGGTGGGCTTCTTACTCTGTAGCTCATAGATTCATTTGGAGTGGTCTAAGCTACTACACAAGTAAGAAGGATGAGAGTTGTATAAGTGGATATGGTTTTAAAGCAGATTCCAAGGCAACAGTGGCAGTTCAAGGCTTGAGTGCAACCTTTGCCAGTGGGGTTTGTGCTATGATAACAATGCCATTGGATACCATCAAGACCAGATTGCAAGTTTTGGATGGAGAAGAAAATGGCCAGAGACGCCCTCTAACAGCGTTGCAGACCGTAAGGAACTTGGTGAAGGACGGCGGTCTGAATGCTTGTTATAGAGGGCTTGGACCGAGGTGGGCTTCGATGGCTATGTCTGCAACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCTAAGAACCAAGATCGTTTGAGCTGA | 1047 | 44.03 | MSLDAAEDESTSEIHIPAEVDWDMLDKSKFFVLGAALFSGVSTALYPIVVLKTRLQVSSTKLSCFKMSYSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATIRLGLSDTTAMAVANAAAGLSSAMAAQLVWTPVDVVSQRLMVQGSCINAKNSVSNLNSCVYKNGIDAFRKIIYADGLRGLYRGFGISILTYAPSNAVWWASYSVAHRFIWSGLSYYTSKKDESCISGYGFKADSKATVAVQGLSATFASGVCAMITMPLDTIKTRLQVLDGEENGQRRPLTALQTVRNLVKDGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQDRLS | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1537744 | 1538790 | + | CmoCh09G003560.1 | Cmo09g00356 | 388358 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g00356 | 348 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 346 | - | - | |
Cmo09g00356 | 348 | Gene3D | Mitochondrial carrier domain | 29 | 347 | IPR023395 | - | |
Cmo09g00356 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 27 | 108 | IPR018108 | - | |
Cmo09g00356 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 249 | 339 | IPR018108 | - | |
Cmo09g00356 | 348 | SUPERFAMILY | Mitochondrial carrier | 23 | 336 | IPR023395 | - | |
Cmo09g00356 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 221 | IPR018108 | - | |
Cmo09g00356 | 348 | Pfam | Mitochondrial carrier protein | 126 | 222 | IPR018108 | - | |
Cmo09g00356 | 348 | Pfam | Mitochondrial carrier protein | 250 | 343 | IPR018108 | - | |
Cmo09g00356 | 348 | Pfam | Mitochondrial carrier protein | 34 | 107 | IPR018108 | - | |
Cmo09g00356 | 348 | PRINTS | Mitochondrial carrier protein signature | 40 | 58 | IPR002067 | GO:0055085 | |
Cmo09g00356 | 348 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085 | |
Cmo09g00356 | 348 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085 | |
Cmo09g00356 | 348 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN | 1 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02937 | Cmo-Chr4:20803476 | Cmo09g00356 | Cmo-Chr9:1537744 | 7.46E-88 | dispersed | |
Cmo08g00754 | Cmo-Chr8:4770418 | Cmo09g00356 | Cmo-Chr9:1537744 | 4.73E-162 | dispersed | |
Cmo09g00356 | Cmo-Chr9:1537744 | Cmo17g00679 | Cmo-Chr17:6942765 | 7.42E-159 | dispersed | |
Cmo01g01800 | Cmo-Chr1:13244977 | Cmo09g00356 | Cmo-Chr9:1537744 | 7.33E-18 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g00356 | K15121 | - | csv:101213436 | 605.905 |