Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00394 ATGGCGAAAACGGCGTCGTGTAGCGATATATGCAAGTCGTTTTTACTTCTTCTGGTTTTGTCTGTTCCGGCATCGACGGTGGCCTTGTCGTTCGGGTTTTACGCTGCCACGTGTCCTGCGGCGGAGTTTATGGTCCGGAATATCGTTAGATCGGCTTCCTCCGTTGACCCCACCGTTCCCGGCAAGCTCCTCCGACTTCTCTTCCATGACTGTTTTGTTGAGGTCAGAAATGGAACGGAAAGAACTGACCCAGGAAACAAGTCTCTTGGAGGCTTTGAAGTTATTGATTCAGCTAAGAGAAATCTTGAATTTTTCTGTCCCCAAACTGTCTCCTGTGCCGACATTGTCGTTTTGGCCGCCAGAGATGCCGTTGAATTCACCGGCGGGCCCTTCGTCCAAGTCCTCACCGGCCGGAGAGACGGAAAAATATCGGCGGCGTCAAACGTCCGACCAAACATTGTCGACACAAGCTTTTCAGTCGACCAAATGATGACTCTCTTCTCATCAAAAGGGCTGTCGGCGGACGATCTCATCGTCCTTTCTGGGGCCCACACCATCGGAACGGCTCACTGCAGCGCCTTCAGTGACCGCTTCAGAAGAGATCCAAACGGCCGAATGAGCCTCGTCGACGCCTCTCTGGACGGCTCATATGCCAACGAGCTTATGCGGCGGTGCTCCGCCGGTGCCGCCTCCGCCGTCACCGTCGAAAACGATCCGGCGACGGCGGCTGTCTTCGACAATCAGTACTACAAAAACATTCTGTCGCACAAAGGGCTGTTTCAGTCGGATTCTGTTCTGATTAGCGACGGCCGGACCAGGGCCCGGGTGGAGAGCCTTGCAGAGGATCAGATTGGGTTCTTTGAAAGCTGGGCTCAGTCGTTCTTGAAACTCAGTAGTATTGGAGTTAAAAGTGGGGACGAAGGGGAAATTAGATTGTCTTGTTCTTCTAATAATGTTTGA 960 52.81 MAKTASCSDICKSFLLLLVLSVPASTVALSFGFYAATCPAAEFMVRNIVRSASSVDPTVPGKLLRLLFHDCFVEVRNGTERTDPGNKSLGGFEVIDSAKRNLEFFCPQTVSCADIVVLAARDAVEFTGGPFVQVLTGRRDGKISAASNVRPNIVDTSFSVDQMMTLFSSKGLSADDLIVLSGAHTIGTAHCSAFSDRFRRDPNGRMSLVDASLDGSYANELMRRCSAGAASAVTVENDPATAAVFDNQYYKNILSHKGLFQSDSVLISDGRTRARVESLAEDQIGFFESWAQSFLKLSSIGVKSGDEGEIRLSCSSNNV 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1738150 1739617 - CmoCh09G003940.1 Cmo09g00394 388396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00394 319 ProSiteProfiles Plant heme peroxidase family profile. 28 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 Pfam Peroxidase 45 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 Gene3D Peroxidase, domain 2 154 297 - -
Cmo09g00394 319 SUPERFAMILY Heme-dependent peroxidases 29 317 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 Gene3D - 32 318 - -
Cmo09g00394 319 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 CDD secretory_peroxidase 29 315 IPR033905 GO:0004601|GO:0042744
Cmo09g00394 319 PANTHER PEROXIDASE 25-RELATED 20 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Cmo09g00394 319 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo09g00394 319 PANTHER PEROXIDASE 18-RELATED 20 317 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01729 Cmo09g00394 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00394 Cmo-Chr9:1738150 Cmo18g01236 Cmo-Chr18:12206483 2.38E-75 dispersed
Cmo01g01729 Cmo-Chr1:12933561 Cmo09g00394 Cmo-Chr9:1738150 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00394 K00430 K18328 csv:101211842 530.791