Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00483 ATGAGTATCGTAAACGTTAATTTTCAAGTTGAAGATCGCTCTGGTAGAATCACGAGAGCACGGGCAAAAGAATTAAGCGAATCAGGAGACGTTCCATGCTCCTCAAAATCTTCTGGAGTTCAGAAGCATATTGTACGAGCTAACTCAAAAAGAGTGGCATCTGATGATATTAATATTTGTTCTATTTGTTCAATTTCTTCCAGTGGCCTTCCTAATAAAAGAAGAGCAGTGCTCAAGGATGTGACTAACATTTCCACCAAAGGTTCTGATAAGAATTGCAGAAATGCTTCTAATATTCAGGGTGACAAACCAACTAGAAGAATTTCTGCTAAAGCTAAGGCAAATGCGCCTTTAAATGCTCCTGTAGAAATTCTAGGAGCAGAAGAAGATGAAAACACAAGATTAGCTGAGGACTTATCTAAAATAAGGGTGGTAGAATCGCGAGAGGTCTCTTTAAGAGAAACTCTTTGTCACACCAGCGGAGAATGTGGAGTTTTAGATATGGTTCTCTCTGTATCTTCAGAAGAATCTATCCCTCAGCCGAATGAAAAATATATGGCATCTGAACAATCGGCAGCATCAAGTGATACAGGTGTTATAGACATTGATTCAAACACCAAATGTCTTCAATCATGCAGCATATATGCTCCAGACATATATGACAGAATACGTGTGACGGAGCTTGATCAAAGGGCCTCAACTACCTATATGGAACAGTTGCAGCAAGATATCACTGCAGACATGCGAGGAATACTGGTTGATTGGCTTATAGAGGTTTCTGACGAATACAAGCTGGTTCCAGATACACTCTACCTCACTGTGAATGTTATTGATCGGTTTCTCTCTCGAAATTGTATTGAAAGAAAGCGTCTCCAGCTTCTCGGTGTTGCAAGCATGCTAATTGCATCAAAATATGAGGAGATCTGTGCTCCAGGAGTGGAAGATTTCTGCTTCATTACAGATAATACTTACACAAAAAGAGAGGTGGTAGAAATGGAGAGTAAAGTTTTGAACTTACTGCACTTTCGGCTATCTGTTCCCACTACAAAGACATTTCTAAGGAGATTCATACAATCGGCTCATGCTTCTTACAAGGTTCCTTGCATTGAACTTGAGTTTTTGGCCAATTATTTAGCTGAGTTGACTCTTGTTGAATACAGCTTCCTAAAGTTCCTTCCTTCACTGATCGCCGCATCCGCCGTTTTTCTTGCAAGATGGACACTCGACCAATCGGATCATCCCTGGAATCCAACTCTGGAGCACTATACATGTTACAACGCTTCTGAGCTGAAGACTGTTGTGCTTGCCCTCCAAGACTTGCAACTTAACGCCAGTGCTTCCCCCTTAAATGCCATACGTCAGAAGTATAGACAACCAAAGTTCAAATGCGTAGCGACATTAACGTCGTCTCGATCGGTTCTATCACTATTTGAAGAACAAGATTGA 1446 40.94 MSIVNVNFQVEDRSGRITRARAKELSESGDVPCSSKSSGVQKHIVRANSKRVASDDINICSICSISSSGLPNKRRAVLKDVTNISTKGSDKNCRNASNIQGDKPTRRISAKAKANAPLNAPVEILGAEEDENTRLAEDLSKIRVVESREVSLRETLCHTSGECGVLDMVLSVSSEESIPQPNEKYMASEQSAASSDTGVIDIDSNTKCLQSCSIYAPDIYDRIRVTELDQRASTTYMEQLQQDITADMRGILVDWLIEVSDEYKLVPDTLYLTVNVIDRFLSRNCIERKRLQLLGVASMLIASKYEEICAPGVEDFCFITDNTYTKREVVEMESKVLNLLHFRLSVPTTKTFLRRFIQSAHASYKVPCIELEFLANYLAELTLVEYSFLKFLPSLIAASAVFLARWTLDQSDHPWNPTLEHYTCYNASELKTVVLALQDLQLNASASPLNAIRQKYRQPKFKCVATLTSSRSVLSLFEEQD 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2184891 2190588 + CmoCh09G004830.1 Cmo09g00483 388485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00483 481 Pfam Cyclin, C-terminal domain 347 469 IPR004367 -
Cmo09g00483 481 CDD CYCLIN 248 337 IPR013763 -
Cmo09g00483 481 PIRSF Cyclin_A_B_D_E 19 480 IPR039361 -
Cmo09g00483 481 CDD CYCLIN 345 437 IPR013763 -
Cmo09g00483 481 SUPERFAMILY Cyclin-like 210 344 IPR036915 -
Cmo09g00483 481 PANTHER CYCLINS 52 477 IPR039361 -
Cmo09g00483 481 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Cmo09g00483 481 SMART cyclin_7 254 338 IPR013763 -
Cmo09g00483 481 SMART cyclin_7 351 439 IPR013763 -
Cmo09g00483 481 Gene3D - 232 345 - -
Cmo09g00483 481 SUPERFAMILY Cyclin-like 346 468 IPR036915 -
Cmo09g00483 481 Pfam Cyclin, N-terminal domain 218 345 IPR006671 -
Cmo09g00483 481 SMART Cyclin_C_2 347 470 IPR004367 -
Cmo09g00483 481 PANTHER CYCLIN-A2-4 52 477 - -
Cmo09g00483 481 Gene3D - 218 466 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00616 Cmo-Chr8:3755573 Cmo09g00483 Cmo-Chr9:2184891 3.63E-131 dispersed
Cmo09g00483 Cmo-Chr9:2184891 Cmo17g00798 Cmo-Chr17:7649458 4.40E-143 dispersed
Cmo01g01578 Cmo-Chr1:12108486 Cmo09g00483 Cmo-Chr9:2184891 0 wgd
Cmo12g00256 Cmo-Chr12:1659706 Cmo09g00483 Cmo-Chr9:2184891 3.56E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00483 K06627 - csv:101204275 782.711