Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00495 ATGACGACACCAATGTCCGAAACAAGGTCGCCGTTGCCTTTGCTGTTCCGGCGGCACTCAAGTGGCGAAATAAAGAACTTGACGTCGGTTTCCAGCAGCCTTTTGCCGGCGTTTGGAACTGTTGTGACCGATGGATACTCAAACCTGAACAAGTTCATTATAGTTCCGTATGATAGAAGATATCGGTGGTGGCAAACTTTCCTGGTAGTGCTTGTGGTGTACTCAGCGTGGGTATCTCCCTTTGAGCTTGCCTTCAAGAAAGTGGCAACTGGGTCTCTTTTACCCGTTGATTTGGTGGTGGATGCATTCTTTGCCCTTGATATTGTCTTGACCTTCTTCGTGGCTTATTTGGATAAATCCACTTATCTCCTCGTTGATGATCATAAGAAGATTGCTGTACGTTACCTTACAAGCCTGTGGTTCCCCATGGACGTAGCCTCCACTCTTCCATTTCAGGTAATATACAGAATTTTCACTGGAAAGATGAACCGCAATGAGGTCTTCGGTTTCCTCAACTTACTTCGGTTCTGGCGACTAAGGCGTGTTAGTGAACTTTTCTCAAGGCTGGAGAAAGACATACGCTTCAGTTACTTTCTAACAAGACTCGTCAAACTAATTTGTGTTACATTGTTGGCAGTTCATTCAGCTGGTTGTTTCTACTACTGGCTGGCAATTCATCATAAAGATGCAGAAAATACATGGATTGGAATTGAAGTAGAAGATTTTAAAAGCAGAAGTATCTGGCTTGGCTACACCTATTCAATATATTGGTCAATTGTCACACTTGCTACCGTTGGTTATGGGGACTTGCATGCAGTTAATCTAGGGGAGAAGATTTTTAGCATCTGCTACATGTTATTCAACATCGGCCTCACGTCTTACTTGATAGGAAACATGACAAATCTCATCGTTCACAGTGCTATCCGAACATTTATCATGAGGGATTCCATAAATGAGATATTGCGTTATGGAAGCAAGAATAGACTGCCAGAAAGCTTGAAAGATCAAATGTTGGCGCACATGCAGCTCAAGTTCAAGACAGCAGAGTTGAAGCAAGAAGAGGTGTTGGAGGATTTACCTAAAGCAATCAGAACCAGTATTGCCCAGCACCTTTTCCGTCGTACAGTTGAGAATGCATACTTATTCAAGGATCTATCTAACGACTTAATCGCCCAATTGGTGTCTGAGATGAAAGCCGAGTACTTTCCACCTAAAGTTGACATTATAATACAAAACGAGATACCAACAGATTTCTACATTTTGGTGTCTGGATCAGTGGATGTGATCGTGTACAAGACTGGAACTGAACAGATTTTGTCAAAGCTGGAATCTCCACAGATGGCAGGGGAAATTGCTGTGATGTTGAATATCCCACAGCCATTTACAGTGAGAACTAGAAGACTCTCCCAAGTCATCAGGATCAGTCATCATCATTTTAAGCAAATGTTACAACCAAACAACGAAGATGGAAAAACCCTTTTCATCAACTTCACTGAGCACTTGAAGGGGATGAAAAAGGAGGAGCAAAACGAAATACCCTACTTTTCAGAGTTGCTGGAAGACCTAAATTCAGAGTTCACAGAATCGAATGAGACACAAAATCAGAGACTACCAGATTATCATGGAGATCAAGAAATGGAAGGATTGCCAGAAGCATCTACACCATTGCCACATACAGATCGCATCAGGGTGATAATTCGCGACCACCATCCAGATGAAGGTACAAAAGATGCCAACGGTATGGGAAAACTGGTATTTTTGCCCAAGTCGATTGAAGGACTTTTCGGATTGGCAGAGAAAAGATTTGGCAAGAGAGGGAGCTCAATTTTCATGGCTGATGGCTCTAAAGTAGAAGACTTGAATGTTTTAAGAGAGGGTGATCATTTATTTTTTGTCTGA 1899 42.23 MTTPMSETRSPLPLLFRRHSSGEIKNLTSVSSSLLPAFGTVVTDGYSNLNKFIIVPYDRRYRWWQTFLVVLVVYSAWVSPFELAFKKVATGSLLPVDLVVDAFFALDIVLTFFVAYLDKSTYLLVDDHKKIAVRYLTSLWFPMDVASTLPFQVIYRIFTGKMNRNEVFGFLNLLRFWRLRRVSELFSRLEKDIRFSYFLTRLVKLICVTLLAVHSAGCFYYWLAIHHKDAENTWIGIEVEDFKSRSIWLGYTYSIYWSIVTLATVGYGDLHAVNLGEKIFSICYMLFNIGLTSYLIGNMTNLIVHSAIRTFIMRDSINEILRYGSKNRLPESLKDQMLAHMQLKFKTAELKQEEVLEDLPKAIRTSIAQHLFRRTVENAYLFKDLSNDLIAQLVSEMKAEYFPPKVDIIIQNEIPTDFYILVSGSVDVIVYKTGTEQILSKLESPQMAGEIAVMLNIPQPFTVRTRRLSQVIRISHHHFKQMLQPNNEDGKTLFINFTEHLKGMKKEEQNEIPYFSELLEDLNSEFTESNETQNQRLPDYHGDQEMEGLPEASTPLPHTDRIRVIIRDHHPDEGTKDANGMGKLVFLPKSIEGLFGLAEKRFGKRGSSIFMADGSKVEDLNVLREGDHLFFV 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2271903 2279261 - CmoCh09G004950.1 Cmo09g00495 388497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00495 632 PANTHER POTASSIUM CHANNEL AKT1 62 631 IPR045319 GO:0005249|GO:0006813
Cmo09g00495 632 PANTHER POTASSIUM CHANNEL AKT1 1 62 IPR045319 GO:0005249|GO:0006813
Cmo09g00495 632 Gene3D - 63 305 - -
Cmo09g00495 632 CDD CAP_ED 381 493 IPR000595 -
Cmo09g00495 632 Pfam KHA, dimerisation domain of potassium ion channel 563 631 IPR021789 -
Cmo09g00495 632 ProSiteProfiles KHA domain profile. 563 632 IPR021789 -
Cmo09g00495 632 Gene3D Jelly Rolls 345 511 IPR014710 -
Cmo09g00495 632 SUPERFAMILY cAMP-binding domain-like 310 500 IPR018490 -
Cmo09g00495 632 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 1 62 - -
Cmo09g00495 632 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 62 631 - -
Cmo09g00495 632 Pfam Cyclic nucleotide-binding domain 401 484 IPR000595 -
Cmo09g00495 632 ProSiteProfiles cAMP/cGMP binding motif profile. 381 500 IPR000595 -
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 251 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 277 288 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 PRINTS EAG/ELK/ERG potassium channel family signature 295 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cmo09g00495 632 Pfam Ion transport protein 61 304 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cmo09g00495 632 SMART cnmp_10 381 498 IPR000595 -
Cmo09g00495 632 SUPERFAMILY Voltage-gated potassium channels 56 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00495 Cmo-Chr9:2271903 Cmo13g00587 Cmo-Chr13:6533380 0 dispersed
Cmo01g01592 Cmo-Chr1:12216357 Cmo09g00495 Cmo-Chr9:2271903 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00495 K21867 - csv:101215177 1121.69