Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00524 ATGGCTCCTAGATTGGGGTTTCTGTGTCGGTGGGGAAAAGAGAAAGATCCTCAAAAAGGAACTCCGGTGGTTGTGACGATGGAGAAGCCTAACTTCTCCGTCGTGGAGATCGACGGTCCCGACGCCGCATTCCGGCCGGTGGAGAAAAGTAGAGGCAAAAATACCAAACAGGTCACGTGGATTCTTCTTCTCAAGGCCAATCGAGCCGTCGGTTGCATAGCTTGGCTTGTTACAGTTCTCTGGACATTGTTGGGAACAATCAAGAAGAGGCTGATCTACCGGCAAGGAATCGCCATTGAAGGCGGGAAGCTGGGAAGAGGGAGATTACTGTTTGGAGTTATTAGAGTTTTCTTAGTAACTTCCATTGGGATTCTTGCTTTTGAAATGCTTGCTTATTTCAAAGGCTGGCATTACTTTCAGCATTCTAATCTGCATATTCCTCAGGCTTCTGAGTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTGTAGAGCAGAGTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTCTGTTCCTTATCCAATCGGTGGATCGTATGATCCTTTGTTTTGGTTGCCTATGGATAAAGTACAAGAGAATTGAACCCAAGATTGAAGGGGATCCCTTCAGGTCGGATGATGTGGAGGGAGGTGGATACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAACGGGAGGTTTTCAGAGATTTGATTATCGTTTATGAGCAGTCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGACCATTTACTCATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGTTAATTAAGGCTGAGGTTGCTAAATGGAGCCATAAGGGGGTTAACATAGTCTATCGCCATCGATTAGTAAGAACGGGATATAAAGCTGGGAATCTGAAATCTGCAATGAGTTGTGATTATGTTAGAGACTACGAGTTTGTTGCAATTTTCGACGCTGACTTTCAACCTAACCCGGATTTTCTTAAGCTGACCGTCCCCCATTTCAAGGATAACCCAGAGCTAGGTTTGGTCCAGGCCAGATGGTCGTTTGTGAACCGGGACGAAAACTTGTTGACACGCCTTCAAAACATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTCAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAGGCGCTCGAGGAGTCCGGAGGGTGGCTTGAAAGAACGACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAGATTCGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCCGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTCCCTTCCAGCAGTCATGAGTTCTAAGATATCAGCATGGAAGAAGGCAAATTTGATACTATTGTTCTTTCTACTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACGTTGTTCTGCATAATCCTTCCTCTAACCATGTTCGTACCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTACGTGCCCGTCTTCATGTCGTTACTCAACATTCTTCCATCCCCAAAATCATTTCCTTTTATTGTCCCCTACCTTCTTTTTGAAAACACCATGTCCGTAACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACTAAAAAGGCTGGGAGATCCTCCGAATCCGACTTACTGGCTGCTGCCGAAAGGGACTCTAAGATAACGAATCAAGCGCAGATATATAGAGGCGCTTCCGAGAGCAAGATTTCTGAGTTGACTCACTTAAAGGAGCGCAAAGAAGTTGTCTCTGCACCTGTCAAAAAAGTAAACAAGTTATATCGAAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTTCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2109 44.48 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNTKQVTWILLLKANRAVGCIAWLVTVLWTLLGTIKKRLIYRQGIAIEGGKLGRGRLLFGVIRVFLVTSIGILAFEMLAYFKGWHYFQHSNLHIPQASELQGLLHSLYVAWLTCRAEYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKYKRIEPKIEGDPFRSDDVEGGGYKYPMVLVQIPMCNEREVFRDLIIVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQLLIKAEVAKWSHKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNRDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWRFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLSLPAVMSSKISAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKITNQAQIYRGASESKISELTHLKERKEVVSAPVKKVNKLYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2448784 2452518 - CmoCh09G005240.1 Cmo09g00524 388526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00524 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 537 IPR029044 -
Cmo09g00524 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 702 - -
Cmo09g00524 702 PANTHER - 13 702 - -
Cmo09g00524 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 225 456 IPR029044 -
Cmo09g00524 702 Pfam Glycosyl transferase family group 2 331 533 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01821 Cmo-Chr1:13352801 Cmo09g00524 Cmo-Chr9:2448784 0 dispersed
Cmo04g02854 Cmo-Chr4:20351480 Cmo09g00524 Cmo-Chr9:2448784 0 dispersed
Cmo09g00311 Cmo-Chr9:1348139 Cmo09g00524 Cmo-Chr9:2448784 0 dispersed
Cmo09g00524 Cmo-Chr9:2448784 Cmo15g00330 Cmo-Chr15:1534075 0 dispersed
Cmo01g01628 Cmo-Chr1:12376518 Cmo09g00524 Cmo-Chr9:2448784 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00524 - - csv:101217415 1293.87