Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00527 ATGTGGTTACCAAGATACGGGCTTGAGAGGAAAGAGAAACTGGATGTGAAGGGAATTGTGGCTGTGGCAATTGACAGAGACAAGGGAAGCCAAGGGGCTCTCAAATGGGCCGTTGATTATTTGCTTCAAAGGGGTCAATCAGTTTTCCTCATTCATGTCAAACTCAGATCCCCTTCTAATTCTTCCCAAAAGATGAGCTCTAAATCTGACTCTGAAGCCAGCATCAAAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGGAAGGATATACAATGCATGGATGTTGTGTTGGAAGATACAGATGCAGCAAAGGCCATAATTGAGTATGCAGCAAATAAGGCCATAGAGAACATTGTTATGGGAGCTTCAGCAAAATCTGGCTTCTTAAGATTCAAGACAAACGATGTTCCTGGCAGTGTAGTAAAAGGAGCACCAGATTTTTGTAATGTGTTTGTGATTTCTAAAGGGAAAGTTCAATCGATGCGTTCGGCATCTCGTCCCGCTCCAGTGATTAGTCCTCTACGAAGTCAATTAGCTCAACAAAGCAGCACGAAATCCGATACGCCCGAGATCCAGATGACTCACTCTGCCAGTGCAAGAGCGTCTGCGGATAGGCCACCCCTTGATCTGCCATGTAATCTGCCATGTAATCTGCCATGTAATCTGCCATGTAATCTGCCATGTAATCTGCCAAGTAAAGTGCAGGATGACACCGATTTCATGAGGTCACCATTCACAAGGAAAGGATATAATTACAAACCATCATCATATGGAGATTTACCGACGCAAGAATCGGATATATCTTTCGTTAGCTCCGGAAGACCGAGCATCGATCGTATATTTCCTTCACTTTATGATAGTCAAGATACAGGAGGAAGATCCACACCACCACAGGTTTCAAGCAGTACAGATTTTGACTTACCTCATAGCTTTGAGTCTCTACAGATGGGACGGATGTCAGCGGATATGAACTTTTCGTCCGAGTTCTCTTCGATCTCGCAAGACAGTGACAGACTTTCGATCTCGTCACAGTCTATGGAAGACGTCGAGGCCGAGATGCGGAGGCTCAGGCTAGAACTCAAGCAAACTATGGAAATGTACAGCACAGCCTGCAAGGAAGCTCTTACAGCCAAACAAAAGGCGGTCGAGCTACAACGATGGAAATTAGAAGAAGAACAGAGATTAGAGGAGGCGAGATTGGCCGGGGAAGCTGCATTAGCGCTAGCGGAACAGGAGAAGTTGAAGTCGAAAGCAGCCATCGAGGCAGCTGAAGCGGCTCGGAGAATTGCAGAATTGGAAGGACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAGGAGAAGAAAAAGGCAGTTGATGCATTGGCAAACAATGATATCAGGTATAGGAAGTATACAATCGACGAGATCGAAGTGGCAACGGAATTCTTTGCTGAATCTCGTAAGATCGGAGAAGGAGGCTATGGTCCTGTTTACAGGTGTGATCTTGATCATACTCCCGTTGCCATTAAGGTTCTACGTCCCGATGCGACTCAAGGACGATCGCAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGTCATCCGAACATGGTTCTCCTCCTCGGAGCTTGCCCCGAGTATGGCTGCTTGGTCTATGAGTACATGGCTAATGGGAGCTTAGAAGACCGACTTCTTCGACGAGGAAACACGCCACCACTTTCTTGGCAGCTCAGATTCAAAATTGCAGCTGAAATTGGGACAGCATTGCTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCACCGTGATCTCAAACCGGCTAACATTCTGCTCGATCGTAACTTTGTCAGTAAGATCAGTGATGTTGGCTTGGCTAGGCTCGTACCGCCATCGATTGCTAATAGTGTAACACAATATCGAATGACATCGACCGCTGGAACATTTTGCTACATTGATCCCGAGTATCAGCAGACAGGTATGCTTGGTGTGAAATCCGACATATACTCGCTAGGCATCATGTTTCTCCAACTGATCACTTCTAGGCCACCAATGGGATTGACTCACCATGTCGAAAGAGCTATCGAGAATGGGACGTTTGAAACTATCCTCGACCCAGCCGTCCTTGATTGGCCTATTCAAGAAGCTTTGTCTTTCGCCAAGATGTCGCTCAAGTGTGCCGAGTTACGACGTAAAGATAGGCCTGATCTTGGTAAGGCCATCCTTCCAGAGCTTAACAGGTTGAGAACTATTGCAGAAGATACAACGCACCCAACACTGATGGGGGGAGACATAAGCCCCTCTCGCAGCAACAGCCAAGTTTCTCTTCAATTTGGATCGTCACCGCAATCATACAATAGCTCGAGAAACCCATCGACGACAACTTTTTGA 2388 46.15 MWLPRYGLERKEKLDVKGIVAVAIDRDKGSQGALKWAVDYLLQRGQSVFLIHVKLRSPSNSSQKMSSKSDSEASIKELFLPFRCFCTRKDIQCMDVVLEDTDAAKAIIEYAANKAIENIVMGASAKSGFLRFKTNDVPGSVVKGAPDFCNVFVISKGKVQSMRSASRPAPVISPLRSQLAQQSSTKSDTPEIQMTHSASARASADRPPLDLPCNLPCNLPCNLPCNLPCNLPSKVQDDTDFMRSPFTRKGYNYKPSSYGDLPTQESDISFVSSGRPSIDRIFPSLYDSQDTGGRSTPPQVSSSTDFDLPHSFESLQMGRMSADMNFSSEFSSISQDSDRLSISSQSMEDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKLKSKAAIEAAEAARRIAELEGQKRMKAEMKALKEAEEKKKAVDALANNDIRYRKYTIDEIEVATEFFAESRKIGEGGYGPVYRCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLLRRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIENGTFETILDPAVLDWPIQEALSFAKMSLKCAELRRKDRPDLGKAILPELNRLRTIAEDTTHPTLMGGDISPSRSNSQVSLQFGSSPQSYNSSRNPSTTTF 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2474861 2480354 - CmoCh09G005270.1 Cmo09g00527 388529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00527 795 MobiDBLite consensus disorder prediction 175 200 - -
Cmo09g00527 795 MobiDBLite consensus disorder prediction 755 795 - -
Cmo09g00527 795 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 14 783 - -
Cmo09g00527 795 MobiDBLite consensus disorder prediction 288 305 - -
Cmo09g00527 795 ProSiteProfiles Protein kinase domain profile. 481 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00527 795 MobiDBLite consensus disorder prediction 286 305 - -
Cmo09g00527 795 MobiDBLite consensus disorder prediction 165 206 - -
Cmo09g00527 795 Gene3D HUPs 19 154 IPR014729 -
Cmo09g00527 795 Coils Coil 407 459 - -
Cmo09g00527 795 CDD STK_N 19 157 - -
Cmo09g00527 795 Coils Coil 340 367 - -
Cmo09g00527 795 SUPERFAMILY Protein kinase-like (PK-like) 464 738 IPR011009 -
Cmo09g00527 795 Pfam Protein kinase domain 482 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00527 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Cmo09g00527 795 SMART serkin_6 481 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00527 795 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 154 - -
Cmo09g00527 795 Pfam Universal stress protein family 20 146 IPR006016 -
Cmo09g00527 795 MobiDBLite consensus disorder prediction 760 795 - -
Cmo09g00527 795 Gene3D Transferase(Phosphotransferase) domain 1 554 758 - -
Cmo09g00527 795 Gene3D Phosphorylase Kinase; domain 1 459 553 - -
Cmo09g00527 795 Coils Coil 373 393 - -
Cmo09g00527 795 PANTHER OS02G0152300 PROTEIN 14 783 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00773 Cmo-Chr5:4387340 Cmo09g00527 Cmo-Chr9:2474861 0 dispersed
Cmo09g00527 Cmo-Chr9:2474861 Cmo11g01716 Cmo-Chr11:12161082 0 dispersed
Cmo01g01633 Cmo-Chr1:12395026 Cmo09g00527 Cmo-Chr9:2474861 0 wgd
Cmo12g00230 Cmo-Chr12:1521191 Cmo09g00527 Cmo-Chr9:2474861 0 wgd
Cmo05g00647 Cmo-Chr5:3265098 Cmo09g00527 Cmo-Chr9:2474861 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74564 PF00069 Pkinase 2.60E-39 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00527 - - csv:105435028 1200.27