Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00532 ATGGATCCAAATTCGAAGAAGTCGAACAAAATCAGAGACATCGTAAGGCTTCACCAGATCCTGAAGAAATGGCGGAAGTTAGCGGACTCATCGAAAACGGCGAACAAAGCCTCCGGCACGGCGGCGGGATCGGGAGGCAAGAGCATAAAGTTTCTGAAACGAACGCTTTCCTCCGGCGGGGAAATCTCCGGCGGCGCCGTGCCGAAAGGCTATTTGGCGGTGAGCGTCGGAGAGGAGCAAAAGCGATTTGTTATACCGACGCAGTATTTAGGGCATCCGGCGTTCGAGATTCTGTTGAGAGAGGCGGAGGAGGAGTTCGGGTTTCAACAAACGGGGGTTTTGAGGCTGCCGTGTGAAGTAACGGTGTTTGAAAATGTGGTGAAATTGGTGGAGGAGAAGAAGAACGGGGATTTGTTAGGCGGAGAGGAGGTGAAGCAAGTGGAAATGAACTTCAAGTCACTAACGATCTTCATCCTCCTCTCTTTCTCCACCGCCGTGTGCTCTCTGCTGAAAGCAACCGCCGCCGCGTGCGACGCCGAATCCCTGCCGGACCGGCGGAATCTACGATCGGATCAAATCACGGTCCTCATCAACGGCTATTACGAATCCCGCATCCCTCTACTCCAATCAATAGCCGCCACGTATGCCGCATCCCCAATCGTACAAGCCGTACTGATCCTTTGGGGAAATCCCTCAACCTCGTCAAAAACCCTAACGCAATTGGCTCAAAACCTCACCACTGGACCCATTTCCGTAATCCGCCAATCTTCAAACAGCCTCAATTCTCGTTTCCTACCCCATAAGTCCATCCAAACCGGCGCCGTTTTGATCTGCGACGACGACGTCGAGATCGACATATCGTCCCTGGAGTTCGCGTTCAGAGTTTGGGGGAGAAACCCCGAACGACTTGTTGGCTTCTTCGTCCGGTCCCACGATCTAGACCTCTCGAGGCGAGAATGGATCTACACCGTTCATCAAGACAAATACTCGATCGTGCTCACGAAGCTGATGATTCTGAAGATGGAGTATTTGTTCGAGTATACTTGCGGAGGCTTAGCGGCGATGGCCGACATGAGAAGAGTTGTCGATCGGGAGCGCAATTGCGAGGATATCTTGATGAATTTCATGGTGGCCGACATGTCGAACGCTGGGCCTATTCTGGTTGCGGCGCAGAGGATCAGAGACTGGGGGGACCCACGGAATGATTACGATGAGAATGAACGGCTGGGATTGGGGGAGGGGGTTAGTGAGGTGGGGCTAAGTAATAGGAAAGGGGAGCATAGGAAGAGAAGGGGACGGTGTATAACGGAGTTTCATAGACGGCTGGGGAGGATGCCGTTACGGTATCGTTACGGGAAGTTAGTTAATTCAGTTGGCGAGCAGGCTTTGTGTAGAAAAGGAGGGAAGTTGGTCCCTTGCGATCATAACGTACTGTGA 1437 52.61 MDPNSKKSNKIRDIVRLHQILKKWRKLADSSKTANKASGTAAGSGGKSIKFLKRTLSSGGEISGGAVPKGYLAVSVGEEQKRFVIPTQYLGHPAFEILLREAEEEFGFQQTGVLRLPCEVTVFENVVKLVEEKKNGDLLGGEEVKQVEMNFKSLTIFILLSFSTAVCSLLKATAAACDAESLPDRRNLRSDQITVLINGYYESRIPLLQSIAATYAASPIVQAVLILWGNPSTSSKTLTQLAQNLTTGPISVIRQSSNSLNSRFLPHKSIQTGAVLICDDDVEIDISSLEFAFRVWGRNPERLVGFFVRSHDLDLSRREWIYTVHQDKYSIVLTKLMILKMEYLFEYTCGGLAAMADMRRVVDRERNCEDILMNFMVADMSNAGPILVAAQRIRDWGDPRNDYDENERLGLGEGVSEVGLSNRKGEHRKRRGRCITEFHRRLGRMPLRYRYGKLVNSVGEQALCRKGGKLVPCDHNVL 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2512941 2515812 - CmoCh09G005320.1 Cmo09g00532 388534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00532 478 Pfam Auxin responsive protein 29 129 IPR003676 GO:0009733
Cmo09g00532 478 Pfam Glycosyl transferase family 64 domain 193 456 IPR015338 GO:0016021|GO:0016757
Cmo09g00532 478 SUPERFAMILY Nucleotide-diphospho-sugar transferases 193 451 IPR029044 -
Cmo09g00532 478 PANTHER GLYCOSYLTRANSFERASE FAMILY PROTEIN 64 C3 170 473 - -
Cmo09g00532 478 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 189 462 IPR029044 -
Cmo09g00532 478 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 170 473 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01193 Cmo-Chr4:6102010 Cmo09g00532 Cmo-Chr9:2512941 6.86E-21 dispersed
Cmo04g01479 Cmo-Chr4:7579116 Cmo09g00532 Cmo-Chr9:2512941 5.95E-18 dispersed
Cmo06g00005 Cmo-Chr6:19348 Cmo09g00532 Cmo-Chr9:2512941 1.09E-21 dispersed
Cmo09g00532 Cmo-Chr9:2512941 Cmo19g00716 Cmo-Chr19:7493864 2.59E-22 dispersed
Cmo19g01126 Cmo-Chr19:9552783 Cmo09g00532 Cmo-Chr9:2512941 1.83E-19 dispersed
Cmo20g00299 Cmo-Chr20:1463444 Cmo09g00532 Cmo-Chr9:2512941 2.78E-18 dispersed
Cmo17g00605 Cmo-Chr17:6414979 Cmo09g00532 Cmo-Chr9:2512941 9.72E-42 transposed
Cmo01g01637 Cmo-Chr1:12425023 Cmo09g00532 Cmo-Chr9:2512941 5.88E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00532 - - cmo:103503730 574.704