Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo09g00547 | ATGGAAATATTTCTCTATCTTGCTTGCCTTTTAAGATCAGATGCCTATAACTCTTTCTCTCTTGGAAAAGAAGCTAAGAACTCCAAGAAGAACAAGGTGAAGCGACGTCGCACGGAAGGAGCTGCAAAAGCGCAGCCCAGTTCCCCCGGTACAGTTGGTGAATTTGGAGAGGGTTTGATTCGGACTTGGCTGATGGATAAGCTGTGCTGTTTTAATGCTTCATACTCTCGGGTTCGGTCGGCATCGAACTACGGTAAAGGAAGAAGCCATGAAGGAGTAATCAAGTATGGATTCTGCCTTGTGAAAGGGAAAGCTAACCATCCCATGGAAGATTACCATGTTGCTAAGTTCGTTCAAATTCAAGAACATGAATTGGGGCTCTTTGCTATCTACGATGGTCATGTTCAACAAACTGTGCCTGCTTACTTACAAAAGCATCTCTTTTCTAATATCCTCAAAGAGGAGGACTTTTGGGTCGACCCGAACAGCTCCATCTCGAAAGCCTACGAGAAAACGGACCAGGCGATTCTATCCCACAGCTCTGACTTGGGTCGTGGCGGATCAACCGCTGTCACTGCTATTCTGATTAACGGTCAACGACTATGGGTGGCCAACGTTGGAGATTCACGCGCTGTTCTTTCGAGAGGCGGGGAAGCTATACAAATGACCATCGATCACGAGCCGAATGCTGAACGCAGTATCATCGAGAATAAAGGTGGCTTCGTTTCTAACATGCCAGGAGACGTACCTCGAGTGAACGGTCAGCTAGCGGTTTCGCGAGCATTTGGAGACAAGAGCCTCAAATCTCACCTACGATCGGACCCCGACATACGTGATATTAACATAGACGCCAACACAGACGTATTAATCCTCGCTAGCGACGGTCTTTGGAAGGTCATGTCGAATCAAGAAGCGGTCGATATCGCACGAAGAATCAAGGACCCGATGAAGGCTGCAAAGCAGTTAATAACAGAGGCTTTGCTGAACGAGAGTAAAGACGACATATCGTGCATTGTCGTTAGTAAAGAGCACTTTGTTCTGAACCTCCCGATCTTGCTTCTTTCAAGTTCTTGTTCTATAAGGTTTCTTGTCGTCGAGGAATTTTTGGTGAAGCTTCTGAGGAGAAGCTGCCTCCTTCATAGCTCTGGCCGACGTCGCAGTGAAATCGTCTCTATCTTCCCCTAG | 1185 | 47.09 | MEIFLYLACLLRSDAYNSFSLGKEAKNSKKNKVKRRRTEGAAKAQPSSPGTVGEFGEGLIRTWLMDKLCCFNASYSRVRSASNYGKGRSHEGVIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHVQQTVPAYLQKHLFSNILKEEDFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSRGGEAIQMTIDHEPNAERSIIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDINIDANTDVLILASDGLWKVMSNQEAVDIARRIKDPMKAAKQLITEALLNESKDDISCIVVSKEHFVLNLPILLLSSSCSIRFLVVEEFLVKLLRRSCLLHSSGRRRSEIVSIFP | 394 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2610033 | 2615836 | + | CmoCh09G005470.1 | Cmo09g00547 | 388549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo09g00547 | 394 | Pfam | Protein phosphatase 2C | 104 | 335 | IPR001932 | - | |
Cmo09g00547 | 394 | ProSitePatterns | PPM-type phosphatase domain signature. | 127 | 135 | IPR000222 | GO:0043169 | |
Cmo09g00547 | 394 | MobiDBLite | consensus disorder prediction | 27 | 51 | - | - | |
Cmo09g00547 | 394 | Gene3D | - | 90 | 346 | IPR036457 | - | |
Cmo09g00547 | 394 | SUPERFAMILY | PP2C-like | 90 | 340 | IPR036457 | - | |
Cmo09g00547 | 394 | ProSiteProfiles | PPM-type phosphatase domain profile. | 95 | 342 | IPR001932 | - | |
Cmo09g00547 | 394 | PANTHER | PROTEIN PHOSPHATASE 2C | 74 | 341 | IPR015655 | GO:0004722|GO:0006470 | |
Cmo09g00547 | 394 | SMART | PP2C_SIG_2 | 106 | 342 | IPR001932 | - | |
Cmo09g00547 | 394 | SMART | PP2C_4 | 87 | 340 | IPR001932 | - | |
Cmo09g00547 | 394 | CDD | PP2Cc | 94 | 340 | IPR001932 | - | |
Cmo09g00547 | 394 | PANTHER | PROTEIN PHOSPHATASE 2C 10-RELATED | 74 | 341 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g01653 | Cmo09g00547 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00421 | Cmo-Chr4:2094354 | Cmo09g00547 | Cmo-Chr9:2610033 | 1.53E-147 | dispersed | |
Cmo09g00547 | Cmo-Chr9:2610033 | Cmo16g00270 | Cmo-Chr16:1199573 | 1.19E-136 | dispersed | |
Cmo01g01653 | Cmo-Chr1:12520186 | Cmo09g00547 | Cmo-Chr9:2610033 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo09g00547 | K17506 | - | csv:101213414 | 520.39 |