Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo09g00582 ATGCCGCATAGAACGACTTACTTTTTTCCCAGGCAGTTTCCTGATCGCGGATTTGATTCGGCGTCAACCTCCAAACACATTTCGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACTGAAAGCGACGCGAAACCGACCCCGCGGCCTGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTACCTGCTTTTTACGATTGGTTGGTGGATAAGAAAGCAACGCGATCGGCAACAGCTCACGTGAAAACTTGGCTTTCCAATTGCGACGAGGACCGCGAGCTCTTGCTTCCACCGCCTACCTCGGAGCCGGAGCATAATACAGCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGGTAGTAGCTTTGCCGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGGAACTTTTCCAGCGATGTCAAGGATTCATCTGCGTCCAAAATATTGTCCTCGCACACGACGAGGCCGGAAGAGATTGAGGTTGGAGATGGTAACGAAAGCATAGCAAAGAAAGCTAAAGAGAGCTATTACCTGCAACTTGCTTTGGCTGCCACGCTTCGTTCCCATGCTAGCCTCGCTGGCGATCCTGTGCTTCTGGAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATATCAGACGGATTCTACAATATTTTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTTGATAGACGTGGGGACTCTCGCCTGAAAGAACTTGAAGACAAAGCACAAGAACTATATTGTGCTTCCGAGAGCACCTTAATGTTAGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGAACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGACTTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGTAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTATATAGGCTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCAGGGAATGTACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCTTCAATTCCTTCACCGCTCCACATTTCTCATTTAAAGGAGTTTCAAGAACCTTACGTGGAAAGTTATCTCAGTCATCAAACCGTTGAGTCGAAGCAAATCTGTGGGTTTCCTGAAAATCCTCTACCTTCAGGTCTTGGAGAGCACCAGGTGAAAGGAGGAAGCACTTTGCATAGAAGTTCAGGGGCTGAAATTCATAAAATGGTTGATCAAGCTGGTACGTGTATGAGATCATCTCAGCTGCATGCGGAATCAAAAGTGAGCAAGGAGTGTGTGCTTAAGAATCAAATAATGTCATCCGCTGATGACTCAAACTGCGAGGTGTTGGGTTATGTTGGTGGTGCAGCTTTACGTGAAAACAAAGTTGTCATTGACGAAATCTACCCAGAAGAGAATGTTGTTGCGGGGATTTCACTGAATGAAACTAGCATTAATCTTTCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAAGAGGTCGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCAAAATATCTGACACTTGAACCATCACTTGCAATGGATTGGCTGGAAATTTCCTGGGACGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGTACTGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACCATGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCGATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTCATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAGTATCTGCCCAGGGGTAGTCTATACCGTCTAATCCACCGGCCATCTTCTAGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCGTTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGTGATTTTGGGTTATCCAGATTCAAAGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACGCCCGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCGAATGAGAAGTCCGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAATAGAAGGCTTTCTATCCCATCAAGTACTTCTCCATTGTTGGCTTCCCTAATTGAATCTTGCTGGGCAGACGATCCTGCTCAGCGTCCATCTTTCGCAAGCATAGTCGACTCCCTAAAGAAATTGCTTAAATCTCCACAGCAATTGATAGCAATGGGTGGAACGTGA 2778 46.26 MPHRTTYFFPRQFPDRGFDSASTSKHISDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPEHNTASVKDRSVDRNFDRQVSLPRVSSGSSFAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHTTRPEEIEVGDGNESIAKKAKESYYLQLALAATLRSHASLAGDPVLLEEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRRGDSRLKELEDKAQELYCASESTLMLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLRDFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNVHGPDSSINGGFQSSIPSPLHISHLKEFQEPYVESYLSHQTVESKQICGFPENPLPSGLGEHQVKGGSTLHRSSGAEIHKMVDQAGTCMRSSQLHAESKVSKECVLKNQIMSSADDSNCEVLGYVGGAALRENKVVIDEIYPEENVVAGISLNETSINLSKLSLSTQTDSKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTMQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSSELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLSIPSSTSPLLASLIESCWADDPAQRPSFASIVDSLKKLLKSPQQLIAMGGT 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2850373 2859557 - CmoCh09G005820.1 Cmo09g00582 388584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo09g00582 925 SUPERFAMILY Protein kinase-like (PK-like) 629 908 IPR011009 -
Cmo09g00582 925 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 923 - -
Cmo09g00582 925 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 107 923 - -
Cmo09g00582 925 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672|GO:0006468
Cmo09g00582 925 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672|GO:0006468
Cmo09g00582 925 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672|GO:0006468
Cmo09g00582 925 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672|GO:0006468
Cmo09g00582 925 MobiDBLite consensus disorder prediction 113 134 - -
Cmo09g00582 925 MobiDBLite consensus disorder prediction 19 59 - -
Cmo09g00582 925 Gene3D Transferase(Phosphotransferase) domain 1 734 921 - -
Cmo09g00582 925 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672|GO:0006468
Cmo09g00582 925 SMART serkin_6 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00582 925 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo09g00582 925 MobiDBLite consensus disorder prediction 22 40 - -
Cmo09g00582 925 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cmo09g00582 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Cmo09g00582 925 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Cmo09g00582 925 CDD STKc_MAP3K-like 661 909 - -
Cmo09g00582 925 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01529 Cmo09g00582 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00442 Cmo-Chr6:2118798 Cmo09g00582 Cmo-Chr9:2850373 0 dispersed
Cmo09g00582 Cmo-Chr9:2850373 Cmo11g01013 Cmo-Chr11:5497639 1.42E-29 dispersed
Cmo14g00266 Cmo-Chr14:1195739 Cmo09g00582 Cmo-Chr9:2850373 1.46E-52 dispersed
Cmo14g00267 Cmo-Chr14:1203588 Cmo09g00582 Cmo-Chr9:2850373 5.10E-43 dispersed
Cmo20g00304 Cmo-Chr20:1483839 Cmo09g00582 Cmo-Chr9:2850373 9.98E-51 dispersed
Cmo01g01529 Cmo-Chr1:11809003 Cmo09g00582 Cmo-Chr9:2850373 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74567 PF07714 PK_Tyr_Ser-Thr 6.20E-65 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo09g00582 - - csv:101204522 1684.08